RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RUFY3Q7L099 469 aa25.69■■□□□ 1.7
USP42-205ENST00000465073 RDM1Q8NG50 284 aa25.69■■□□□ 1.7
USP42-205ENST00000465073 CASD1Q96PB1 797 aa25.69■■□□□ 1.7
USP42-205ENST00000465073 UNC45AQ9H3U1 944 aa25.69■■□□□ 1.7
USP42-205ENST00000465073 PUF60Q9UHX1 559 aaKnown RBP25.69■■□□□ 1.7
USP42-205ENST00000465073 C5orf42Q9H799 3197 aa25.69■■□□□ 1.7
USP42-205ENST00000465073 FSCN2O14926 492 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 PER2O15055 1255 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 CHMP2AO43633 222 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 PLCB3Q01970 1234 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 SSRP1Q08945 709 aaKnown RBP25.68■■□□□ 1.7
USP42-205ENST00000465073 UGCGQ16739 394 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 DUSP6Q16828 381 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 Q4G0T1 1027 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 ABI1Q8IZP0 508 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 TBCKQ8TEA7 893 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 PCDHA4Q9UN74 947 aa25.68■■□□□ 1.7
USP42-205ENST00000465073 USP15Q9Y4E8 981 aaPredicted RBP25.68■■□□□ 1.7
USP42-205ENST00000465073 DARSP14868 501 aaKnown RBP25.67■■□□□ 1.7
USP42-205ENST00000465073 TBC1D8BQ0IIM8 1120 aa25.67■■□□□ 1.7
USP42-205ENST00000465073 ECHDC2Q86YB7 292 aa25.67■■□□□ 1.7
USP42-205ENST00000465073 MRPS27Q92552 414 aaKnown RBP25.67■■□□□ 1.7
USP42-205ENST00000465073 SCLT1Q96NL6 688 aa25.67■■□□□ 1.7
USP42-205ENST00000465073 ZSWIM6Q9HCJ5 1215 aa25.67■■□□□ 1.7
USP42-205ENST00000465073 RNF19AQ9NV58 838 aa25.67■■□□□ 1.7
USP42-205ENST00000465073 CYP3A7-CYP3A51PA0A087WV96 503 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 EPB41L2O43491 1005 aaKnown RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 PSMD10O75832 226 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 CYP3A7P24462 503 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 GPC3P51654 580 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 TOB2Q14106 344 aaPredicted RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 TARBP2Q15633 366 aaKnown RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 LRRC55Q6ZSA7 311 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 PLXNA4Q9HCM2 1894 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 LOC730098B7Z3J9 87 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 PPM1AP35813 382 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 CDC42EP1Q00587 391 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 KCNT2Q6UVM3 1135 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 MIER3Q7Z3K6 550 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 FAM177A1Q8N128 213 aaPredicted RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 LRRC43Q8N309 656 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 ZNF274Q96GC6 653 aaPredicted RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 ZNF558Q96NG5 402 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 NIFKQ9BYG3 293 aaKnown RBP25.66■■□□□ 1.7
USP42-205ENST00000465073 KCNH6Q9H252 994 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 CYP46A1Q9Y6A2 500 aa25.66■■□□□ 1.7
USP42-205ENST00000465073 PIEZO1Q92508 2521 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 A0A0U1RQF3 1178 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 CPLX1O14810 134 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 DEXIO95424 95 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 EOMESO95936 686 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 KRT17Q04695 432 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 XKR3Q5GH77 459 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 HFE2Q6ZVN8 426 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 BLIDQ8IZY5 108 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 VN1R2Q8NFZ6 395 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 NLRP7Q8WX94 980 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 EDAQ92838 391 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 GJA10Q969M2 543 aa25.65■■□□□ 1.7
USP42-205ENST00000465073 ZNF668Q96K58 619 aaPredicted RBP25.65■■□□□ 1.7
USP42-205ENST00000465073 PHF7Q9BWX1 381 aaPredicted RBP25.65■■□□□ 1.7
USP42-205ENST00000465073 NGRNQ9NPE2 291 aaKnown RBP25.65■■□□□ 1.7
USP42-205ENST00000465073 SRGAP2BP0DMP2 458 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 CBX2Q14781 532 aaPredicted RBP25.64■■□□□ 1.69
USP42-205ENST00000465073 GALNT17Q6IS24 598 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 TMEM184AQ6ZMB5 413 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 RNF169Q8NCN4 708 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 MFSD14AQ96MC6 490 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 TCF25Q9BQ70 676 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 DACT1Q9NYF0 836 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 SPG21Q9NZD8 308 aa25.64■■□□□ 1.69
USP42-205ENST00000465073 ATF7P17544 494 aaPredicted RBP25.63■■□□□ 1.69
USP42-205ENST00000465073 DNM2P50570 870 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 RBM10P98175 930 aaKnown RBP25.63■■□□□ 1.69
USP42-205ENST00000465073 PLPP4Q5VZY2 271 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 MOXD1Q6UVY6 613 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 B3GNT9Q6UX72 402 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 DAGLBQ8NCG7 672 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 SUSD6Q92537 303 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 GCOM2Q9BZD3 368 aaPredicted RBP25.63■■□□□ 1.69
USP42-205ENST00000465073 ENTPD7Q9NQZ7 604 aa25.63■■□□□ 1.69
USP42-205ENST00000465073 SEPT9Q9UHD8 586 aaPredicted RBP25.63■■□□□ 1.69
USP42-205ENST00000465073 M0R2N6 131 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 TDP2O95551 362 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 KCNC3Q14003 757 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 CLLU1OSQ5K130 101 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 CPLX2Q6PUV4 134 aaKnown RBP25.62■■□□□ 1.69
USP42-205ENST00000465073 ZNF598Q86UK7 904 aaKnown RBP25.62■■□□□ 1.69
USP42-205ENST00000465073 MBOAT7Q96N66 472 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 TM6SF1Q9BZW5 370 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 CHST12Q9NRB3 414 aa25.62■■□□□ 1.69
USP42-205ENST00000465073 STBD1O95210 358 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 FGFR4P22455 802 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 MTERF2Q49AM1 385 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 ETNPPLQ8TBG4 499 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 CEP89Q96ST8 783 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 TRIOO75962 3097 aa25.61■■□□□ 1.69
USP42-205ENST00000465073 IGKV6-21A0A0C4DH24 114 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 DRP2Q13474 957 aa25.6■■□□□ 1.69
USP42-205ENST00000465073 MRPL9Q9BYD2 267 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms