RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 GDF15Q99988 308 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■■□□□ 12.8
APTX-213ENST00000465003 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 A0A087WZ62 844 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 MAGEB2O15479 319 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 CUTAO60888 179 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 GPR32O75388 356 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 EYA4O95677 639 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 GPC3P51654 580 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 LPIN1Q14693 890 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 HYIQ5T013 277 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 RSPH3Q86UC2 560 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 DHX58Q96C10 678 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 DGAT1O75907 488 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 TMOD1P28289 359 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 CD52P31358 61 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 RBL2Q08999 1139 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 SHHQ15465 462 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 ATL3Q6DD88 541 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 DBF4BQ8NFT6 615 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
APTX-213ENST00000465003 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 GOLPH3LQ9H4A5 285 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 TRPV2Q9Y5S1 764 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 M0QZ92 97 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 CASP1P29466 404 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 TXLNAP40222 546 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 RFC5P40937 340 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 LAMTOR4Q0VGL1 99 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
APTX-213ENST00000465003 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 IER5Q5VY09 327 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
APTX-213ENST00000465003 RAD54LQ92698 747 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 ADAMTS10Q9H324 1103 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 USP20Q9Y2K6 914 aa13.2□□□□□ -0.3
APTX-213ENST00000465003 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
APTX-213ENST00000465003 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 POLR2DO15514 142 aaKnown RBP13.19□□□□□ -0.3
APTX-213ENST00000465003 HIP1RO75146 1068 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 GLRA2P23416 452 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 STAT6P42226 847 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
APTX-213ENST00000465003 CAPSQ13938 189 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
APTX-213ENST00000465003 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
APTX-213ENST00000465003 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
APTX-213ENST00000465003 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
APTX-213ENST00000465003 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 TRIOBPQ9H2D6 2365 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
APTX-213ENST00000465003 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
APTX-213ENST00000465003 PFKFB1P16118 471 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 LIG1P18858 919 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 DNM2P50570 870 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
APTX-213ENST00000465003 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 DAW1Q8N136 415 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 SYT2Q8N9I0 419 aaPredicted RBP13.18□□□□□ -0.3
APTX-213ENST00000465003 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
APTX-213ENST00000465003 LRRIQ4A6NIV6 560 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
APTX-213ENST00000465003 CYP11B2P19099 503 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 MUTP22033 750 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 NDUFA8P51970 172 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 MAPK7Q13164 816 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
APTX-213ENST00000465003 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms