RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 USP17L5A8MUK1 530 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 E9PMD0 336 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 SNX3O60493 162 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 PHF2O75151 1096 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 SNHG28P0DPA3 235 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 PAX7P23759 505 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 PDE6CP51160 858 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 SLC12A3P55017 1021 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 HADHBP55084 474 aaKnown RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 NCALDP61601 193 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 IRX1P78414 480 aaPredicted RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 ITPK1Q13572 414 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 NAA25Q14CX7 972 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 ZKSCAN8Q15776 578 aaPredicted RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 GALNTL6Q49A17 601 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 DCAF12L1Q5VU92 463 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 TAOK1Q7L7X3 1001 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 NSMCE1Q8WV22 266 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 CEP95Q96GE4 821 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 PLCD4Q9BRC7 762 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 SYT11Q9BT88 431 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 DHX36Q9H2U1 1008 aaKnown RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 BTG4Q9NY30 223 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 GRHL1Q9NZI5 618 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 MTRF1LQ9UGC7 380 aaKnown RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 AJAP1Q9UKB5 411 aaPredicted RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 PCDHA12Q9UN75 941 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
USP48-206ENST00000464577 COL24A1Q17RW2 1714 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 CDK5RAP2Q96SN8 1893 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PNMA6FA0A0J9YX94 578 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 NPHP3-ACAD11A0A0J9YXS1 232 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 O00370 1275 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PODXLO00592 558 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 LIN7AO14910 233 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 PPP1R12BO60237 982 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 MARCH6O60337 910 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 GGPS1O95749 300 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 RARAP10276 462 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ALAS1P13196 640 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 IBSPP21815 317 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 CCND1P24385 295 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 RPL13P26373 211 aaKnown RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 CALRP27797 417 aaKnown RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 CHRNA3P32297 505 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 SOX5P35711 763 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PTGIRP43119 386 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PPARDQ03181 441 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 LMNB2Q03252 620 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 MYO1EQ12965 1108 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 TCEAL1Q15170 157 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 CNGA2Q16280 664 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PTPROQ16827 1216 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ARSHQ5FYA8 562 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 MAPKAPK5Q8IW41 473 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 TCP11Q8WWU5 503 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 CNKSR1Q969H4 720 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 SLC35C1Q96A29 364 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 COA7Q96BR5 231 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 RUNDC3BQ96NL0 473 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ANKRD27Q96NW4 1050 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ELAC2Q9BQ52 826 aaKnown RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 RTFDC1Q9BY42 306 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 ROPN1BQ9BZX4 212 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 TRIM31Q9BZY9 425 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 UBA5Q9GZZ9 404 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ROPN1Q9HAT0 212 aaPredicted RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 TYW1Q9NV66 732 aaKnown RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 GCNT4Q9P109 453 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 PCYOX1Q9UHG3 505 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 SAP30BPQ9UHR5 308 aaKnown RBP7.9□□□□□ -1.15
USP48-206ENST00000464577 PPP1R9AQ9ULJ8 1098 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 NR2E1Q9Y466 385 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.15
USP48-206ENST00000464577 SYNGAP1Q96PV0 1343 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 ARFGEF1Q9Y6D6 1849 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 POTEB3A0JP26 581 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 MIF4GDA9UHW6 222 aaKnown RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 POTECB2RU33 542 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 AKAP3O75969 853 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 WFS1O76024 890 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 NEBLO76041 1014 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 ANP32DO95626 131 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 NR3C1P04150 777 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 KRT18P05783 430 aaKnown RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 VIMP08670 466 aaKnown RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 CLTAP09496 248 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 VCAM1P19320 739 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 PLTPP55058 493 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 IFI35P80217 286 aaPredicted RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 BNIP1Q12981 228 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 GIT2Q14161 759 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 NFIL3Q16649 462 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 LRCH2Q5VUJ6 765 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 C11orf63Q6NUN7 778 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 POTEBQ6S5H4 581 aa7.89□□□□□ -1.15
USP48-206ENST00000464577 TBC1D1Q86TI0 1168 aaPredicted RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 PNMA8AQ86V59 439 aaPredicted RBP7.89□□□□□ -1.15
USP48-206ENST00000464577 DNAAF5Q86Y56 855 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms