RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 MAN2A1Q16706 1144 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 FIGNQ5HY92 759 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 ZNF569Q5MCW4 686 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
COL5A1-205ENST00000464187 UTP14CQ5TAP6 766 aaKnown RBP15.97■□□□□ 0.15
COL5A1-205ENST00000464187 TAPT1Q6NXT6 567 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-205ENST00000464187 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 KCND2Q9NZV8 630 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 DBR1Q9UK59 544 aaKnown RBP15.97■□□□□ 0.15
COL5A1-205ENST00000464187 A0A1W2PQJ5 194 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 TMEM150BA6NC51 233 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 ZNF862O60290 1169 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL5A1-205ENST00000464187 HOXC6P09630 235 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 ZBED6P86452 979 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.15
COL5A1-205ENST00000464187 HSDL1Q3SXM5 330 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 HERC4Q5GLZ8 1057 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-205ENST00000464187 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 SLC35F6Q8N357 371 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 COPS5Q92905 334 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 PCMTD1Q96MG8 357 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-205ENST00000464187 SH2D3AQ9BRG2 576 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 NDST4Q9H3R1 872 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 ZHX3Q9H4I2 956 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 SIK3Q9Y2K2 1263 aa15.96■□□□□ 0.15
COL5A1-205ENST00000464187 GSTTP1A0A1W2PQM5 241 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 EFCAB8A8MWE9 144 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 H2AFXP16104 143 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-205ENST00000464187 CTGFP29279 349 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 PADI6Q6TGC4 694 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 ANO5Q75V66 913 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 DHX37Q8IY37 1157 aaKnown RBP15.96■□□□□ 0.14
COL5A1-205ENST00000464187 MSL3Q8N5Y2 521 aaKnown RBP15.96■□□□□ 0.14
COL5A1-205ENST00000464187 SOCS4Q8WXH5 440 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 SEPT1Q8WYJ6 367 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 USP6NLQ92738 828 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.14
COL5A1-205ENST00000464187 ABHD16BQ9H3Z7 469 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 POLD4Q9HCU8 107 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 ZNF302Q9NR11 478 aa15.96■□□□□ 0.14
COL5A1-205ENST00000464187 MAFBQ9Y5Q3 323 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-205ENST00000464187 LOXHD1Q8IVV2 1947 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 IGSF9BQ9UPX0 1349 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 MCM3APO60318 1980 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 IGKV6D-21A0A0A0MT36 114 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 RSPH10B2B2RC85 870 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 RSPH10BP0C881 870 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 CYP2B6P20813 491 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 UBXN4Q92575 508 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 SPATA33Q96N06 139 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 ANKEF1Q9NU02 776 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 PLXNA1Q9UIW2 1896 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 ZNF236Q9UL36 1845 aa15.95■□□□□ 0.14
COL5A1-205ENST00000464187 DOCK5Q9H7D0 1870 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 RBM47A0AV96 593 aaKnown RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 TBCAO75347 108 aaKnown RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 GUCY2CP25092 1073 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 TCF7P36402 384 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 ADCYAP1R1P41586 468 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 NPEPPSP55786 919 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 PRKCEQ02156 737 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 ACVR2BQ13705 512 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 XKR9Q5GH70 373 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 PLA2G4FQ68DD2 849 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 OTUD6AQ7L8S5 288 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 IQCDQ96DY2 449 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 PCYT2Q99447 389 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 GPR20Q99678 358 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 COL4A3BPQ9Y5P4 624 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 MYH11P35749 1972 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 SFI1A8K8P3 1242 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 EPHB6O15197 1021 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 STBD1O95210 358 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 TBC1D8O95759 1140 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 RGS2P41220 211 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 PSMC4P43686 418 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 HTRA3P83110 453 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 LACTBP83111 547 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 GJC2Q5T442 439 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 SFR1Q86XK3 245 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 SCFD1Q8WVM8 642 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 ARHGAP39Q9C0H5 1083 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 FLRT1Q9NZU1 646 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 MYO1AQ9UBC5 1043 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 TRIM10Q9UDY6 481 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-205ENST00000464187 ODF2LQ9ULJ1 636 aa15.94■□□□□ 0.14
COL5A1-205ENST00000464187 CENPFP49454 3210 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 CTAGE9A4FU28 777 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 USO1O60763 962 aaKnown RBP15.93■□□□□ 0.14
COL5A1-205ENST00000464187 FAM13AO94988 1023 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 ATP4AP20648 1035 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 STAT5BP51692 787 aa15.93■□□□□ 0.14
COL5A1-205ENST00000464187 FCGRTP55899 365 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms