RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TMOD1P28289 359 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 ZXDAP98168 799 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 PLPP4Q5VZY2 271 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 KCNT2Q6UVM3 1135 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 ZNF710Q8N1W2 664 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 FBXL16Q8N461 479 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 BICD2Q8TD16 824 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 RPGRIP1Q96KN7 1286 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 NRBP2Q9NSY0 501 aa25.57■■□□□ 1.68
USP4-208ENST00000464168 PUF60Q9UHX1 559 aaKnown RBP25.57■■□□□ 1.68
USP4-208ENST00000464168 HOXA2O43364 376 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 OATP04181 439 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 ZSCAN20P17040 1043 aaPredicted RBP25.56■■□□□ 1.68
USP4-208ENST00000464168 BLOC1S2Q6QNY1 142 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 ECHDC2Q86YB7 292 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 ZNF668Q96K58 619 aaPredicted RBP25.56■■□□□ 1.68
USP4-208ENST00000464168 AGXT2Q9BYV1 514 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 S1PR5Q9H228 398 aa25.56■■□□□ 1.68
USP4-208ENST00000464168 HIDE1A8MVS5 230 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 HSPA4P34932 840 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 PBX3P40426 434 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 AKAP17AQ02040 695 aaKnown RBP25.55■■□□□ 1.68
USP4-208ENST00000464168 PRKCEQ02156 737 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 UGCGQ16739 394 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 PBXIP1Q96AQ6 731 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 CCDC136Q96JN2 1154 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 RIT2Q99578 217 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 TCF25Q9BQ70 676 aa25.55■■□□□ 1.68
USP4-208ENST00000464168 RNF26Q9BY78 433 aaPredicted RBP25.55■■□□□ 1.68
USP4-208ENST00000464168 DARSP14868 501 aaKnown RBP25.54■■□□□ 1.68
USP4-208ENST00000464168 GPC3P51654 580 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 USP11P51784 963 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 CLLU1OSQ5K130 101 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 ANKRD54Q6NXT1 300 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 SYCE2Q6PIF2 218 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 LRRC43Q8N309 656 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 SLC5A5Q92911 643 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 ZNF558Q96NG5 402 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 SLC26A6Q9BXS9 759 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 NGRNQ9NPE2 291 aaKnown RBP25.54■■□□□ 1.68
USP4-208ENST00000464168 ENTPD7Q9NQZ7 604 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 VPS54Q9P1Q0 977 aa25.54■■□□□ 1.68
USP4-208ENST00000464168 A0A0U1RQF3 1178 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 GAS7O60861 476 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 IFNAR1P17181 557 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 RPS6KB1P23443 525 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 TECP42680 631 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 ZNF598Q86UK7 904 aaKnown RBP25.53■■□□□ 1.68
USP4-208ENST00000464168 ABI1Q8IZP0 508 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 RNF169Q8NCN4 708 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 CCDC148Q8NFR7 591 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 GJA10Q969M2 543 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 UNC45AQ9H3U1 944 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 SPG21Q9NZD8 308 aa25.53■■□□□ 1.68
USP4-208ENST00000464168 CHMP2AO43633 222 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 SRGAP2BP0DMP2 458 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 FGFR4P22455 802 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 SFNP31947 248 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 PPM1AP35813 382 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 KRT17Q04695 432 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 TARBP2Q15633 366 aaKnown RBP25.52■■□□□ 1.68
USP4-208ENST00000464168 IER5LQ5T953 404 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 LLGL2Q6P1M3 1020 aa25.52■■□□□ 1.68
USP4-208ENST00000464168 PDIA3P30101 505 aaKnown RBP25.51■■□□□ 1.67
USP4-208ENST00000464168 JAK3P52333 1124 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 EVCP57679 992 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 TBC1D8BQ0IIM8 1120 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 LRCH2Q5VUJ6 765 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 TMC7Q7Z402 723 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 APOL5Q9BWW9 433 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 NCOA5Q9HCD5 579 aaKnown RBP25.51■■□□□ 1.67
USP4-208ENST00000464168 SH3GLB2Q9NR46 395 aa25.51■■□□□ 1.67
USP4-208ENST00000464168 CSDE1O75534 798 aaKnown RBP25.5■■□□□ 1.67
USP4-208ENST00000464168 PSMD10O75832 226 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 CACNA1HO95180 2353 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 EOMESO95936 686 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 CCT2P78371 535 aaKnown RBP25.5■■□□□ 1.67
USP4-208ENST00000464168 DRP2Q13474 957 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 PRSS33Q8NF86 280 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 NLRP7Q8WX94 980 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 SCLT1Q96NL6 688 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 CEP89Q96ST8 783 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 TEKT3Q9BXF9 490 aa25.5■■□□□ 1.67
USP4-208ENST00000464168 STBD1O95210 358 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 HOXB8P17481 243 aaPredicted RBP25.49■■□□□ 1.67
USP4-208ENST00000464168 SIGLEC14Q08ET2 396 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 SLC39A11Q8N1S5 342 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 FBXL6Q8N531 539 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 MRPL43Q8N983 215 aaKnown RBP25.49■■□□□ 1.67
USP4-208ENST00000464168 HELQQ8TDG4 1101 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 TBCKQ8TEA7 893 aa25.49■■□□□ 1.67
USP4-208ENST00000464168 NIFKQ9BYG3 293 aaKnown RBP25.49■■□□□ 1.67
USP4-208ENST00000464168 NLRP5P59047 1200 aa25.48■■□□□ 1.67
USP4-208ENST00000464168 Q4G0T1 1027 aa25.48■■□□□ 1.67
USP4-208ENST00000464168 RDM1Q8NG50 284 aa25.48■■□□□ 1.67
USP4-208ENST00000464168 ASIC4Q96FT7 647 aa25.48■■□□□ 1.67
USP4-208ENST00000464168 DACT1Q9NYF0 836 aa25.48■■□□□ 1.67
USP4-208ENST00000464168 WDR81Q562E7 1941 aa25.47■■□□□ 1.67
USP4-208ENST00000464168 CYP3A7-CYP3A51PA0A087WV96 503 aa25.47■■□□□ 1.67
USP4-208ENST00000464168 TMEM150BA6NC51 233 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms