RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 NR2F2P24468 414 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 NCKAP1LP55160 1127 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 TNFAIP2Q03169 654 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 ADAM9Q13443 819 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 PLCB4Q15147 1175 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 SPECC1LQ69YQ0 1117 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 KSR1Q8IVT5 923 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 ZC3H3Q8IXZ2 948 aaKnown RBP20.92■□□□□ 0.94
CCDC78-206ENST00000463539 OR6J1Q8NGC5 347 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 CEP89Q96ST8 783 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 ARHGAP39Q9C0H5 1083 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 POLR3FQ9H1D9 316 aaPredicted RBP20.92■□□□□ 0.94
CCDC78-206ENST00000463539 ERAP1Q9NZ08 941 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 TRPC6Q9Y210 931 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 CCDC169A6NNP5 214 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 CETN3O15182 167 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 GNA14O95837 355 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 LGALS2P05162 132 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 NPTX2P47972 431 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 GSDMDP57764 484 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 PRAMEF19Q5SWL8 479 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 HS2ST1Q7LGA3 356 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 HAUS6Q7Z4H7 955 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 SPIRE2Q8WWL2 714 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 IFT74Q96LB3 600 aa20.92■□□□□ 0.94
CCDC78-206ENST00000463539 LGALS16A8MUM7 142 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 PES1O00541 588 aaKnown RBP20.91■□□□□ 0.94
CCDC78-206ENST00000463539 SLC16A4O15374 487 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 TGFB1I1O43294 461 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 RPL13P26373 211 aaKnown RBP20.91■□□□□ 0.94
CCDC78-206ENST00000463539 SYCP3Q8IZU3 236 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 GOLGA5Q8TBA6 731 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 BSNDQ8WZ55 320 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 GBP3Q9H0R5 595 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 TMEM206Q9H813 350 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 KMT5AQ9NQR1 393 aa20.91■□□□□ 0.94
CCDC78-206ENST00000463539 ADCY6O43306 1168 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 PPFIA4O75335 1185 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 TBC1D8O95759 1140 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 NR3C1P04150 777 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 ZNF865P0CJ78 1059 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 GTF2BQ00403 316 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 TBC1D8BQ0IIM8 1120 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 CCDC40Q4G0X9 1142 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 TMEM143Q96AN5 459 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 ZNF830Q96NB3 372 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 ACCSQ96QU6 501 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 NOC4LQ9BVI4 516 aaKnown RBP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 ARID2Q68CP9 1835 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 MAFO75444 373 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 UBXN1Q04323 297 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 TMEM161BQ8NDZ6 487 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 NTPCRQ9BSD7 190 aaKnown RBP20.9■□□□□ 0.94
CCDC78-206ENST00000463539 KCNG1Q9UIX4 513 aa20.9■□□□□ 0.94
CCDC78-206ENST00000463539 WDR81Q562E7 1941 aa20.89■□□□□ 0.94
CCDC78-206ENST00000463539 HBP1O60381 514 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 IGHA2P01877 340 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 MMP3P08254 477 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.93
CCDC78-206ENST00000463539 PBX1P40424 430 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 EXOC8Q8IYI6 725 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 HVCN1Q96D96 273 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 KIFC3Q9BVG8 833 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 IKZF4Q9H2S9 585 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 AGPAT3Q9NRZ7 376 aa20.89■□□□□ 0.93
CCDC78-206ENST00000463539 ZNF215Q9UL58 517 aaPredicted RBP20.89■□□□□ 0.93
CCDC78-206ENST00000463539 ZBTB42B2RXF5 422 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 ZNF286BP0CG31 522 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 KIF22Q14807 665 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 NFIL3Q16649 462 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 MAN2A1Q16706 1144 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 ZSCAN30Q86W11 494 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 CCDC150Q8NCX0 1101 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 ZKSCAN5Q9Y2L8 839 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 MYH9P35579 1960 aaKnown RBP20.88■□□□□ 0.93
CCDC78-206ENST00000463539 DENND3A2RUS2 1198 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 H0YCG3 227 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 CLIC2O15247 247 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 HOXD8P13378 290 aaPredicted RBP20.88■□□□□ 0.93
CCDC78-206ENST00000463539 ARL2P36404 184 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 MAP2K2P36507 400 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 MARSP56192 900 aaKnown RBP20.88■□□□□ 0.93
CCDC78-206ENST00000463539 SP3Q02447 781 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 PPP2R5AQ15172 486 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 DGKDQ16760 1214 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 MIIPQ5JXC2 388 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 CFHR5Q9BXR6 569 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 KCNF1Q9H3M0 494 aa20.88■□□□□ 0.93
CCDC78-206ENST00000463539 GNEQ9Y223 722 aaKnown RBP20.88■□□□□ 0.93
CCDC78-206ENST00000463539 SLC16A3O15427 465 aaKnown RBP20.87■□□□□ 0.93
CCDC78-206ENST00000463539 DYNC1LI2O43237 492 aaPredicted RBP20.87■□□□□ 0.93
CCDC78-206ENST00000463539 GAS2O43903 313 aaKnown RBP20.87■□□□□ 0.93
CCDC78-206ENST00000463539 ABCD1P33897 745 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 FLT3LGP49771 235 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 DNM2P50570 870 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 ARID5BQ14865 1188 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
CCDC78-206ENST00000463539 TLK2Q86UE8 772 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms