RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
RTCB-202ENST00000463455 IGKV6-21A0A0C4DH24 114 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 C9IYK1 514 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 TNFRSF10AO00220 468 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 SLC37A4O43826 429 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 CLCN3P51790 818 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 NFX1Q12986 1120 aaKnown RBP13.37□□□□□ -0.27
RTCB-202ENST00000463455 COL19A1Q14993 1142 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 UGCGQ16739 394 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 FAM228AQ86W67 206 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 BANK1Q8NDB2 785 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 NSUN7Q8NE18 718 aaKnown RBP13.37□□□□□ -0.27
RTCB-202ENST00000463455 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 OSMRQ99650 979 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
RTCB-202ENST00000463455 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 LRFN2Q9ULH4 789 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 PCDHB7Q9Y5E2 793 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 BDP1A6H8Y1 2624 aa13.37□□□□□ -0.27
RTCB-202ENST00000463455 HOXA2O43364 376 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 SEC24BO95487 1268 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 VTNP04004 478 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 EIF4BP23588 611 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 QARSP47897 775 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 DNM2P50570 870 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 GPC3P51654 580 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 FAM189BP81408 668 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 TFF2Q03403 129 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 DSC3Q14574 896 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 PIK3AP1Q6ZUJ8 805 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 TNFRSF25Q93038 417 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 ADAM2Q99965 735 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
RTCB-202ENST00000463455 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
RTCB-202ENST00000463455 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 MGEA5O60502 916 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 STBD1O95210 358 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 MMP1P03956 469 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 TRIM29Q14134 588 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 LEXMQ3ZCV2 418 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 HAS1Q92839 578 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 GJA10Q969M2 543 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 LLPHQ9BRT6 129 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 AAASQ9NRG9 546 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 METRNQ9UJH8 293 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
RTCB-202ENST00000463455 MRPL42Q9Y6G3 142 aaKnown RBP13.35□□□□□ -0.27
RTCB-202ENST00000463455 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
RTCB-202ENST00000463455 LARGE1O95461 756 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 UBE3AQ05086 875 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 EPHA7Q15375 998 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 MTERF2Q49AM1 385 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 ANO5Q75V66 913 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 LRRC71Q8N4P6 559 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
RTCB-202ENST00000463455 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
RTCB-202ENST00000463455 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 GCOM2Q9BZD3 368 aaPredicted RBP13.34□□□□□ -0.27
RTCB-202ENST00000463455 ATP6V0A4Q9HBG4 840 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 PLAGL2Q9UPG8 496 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 REV3LO60673 3130 aa13.34□□□□□ -0.27
RTCB-202ENST00000463455 FNDC1Q4ZHG4 1894 aaPredicted RBP13.33□□□□□ -0.27
RTCB-202ENST00000463455 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 EML1O00423 815 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 MARCH6O60337 910 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
RTCB-202ENST00000463455 RFC5P40937 340 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 KCNQ1P51787 676 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
RTCB-202ENST00000463455 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 NR5A1Q13285 461 aa13.33□□□□□ -0.28
RTCB-202ENST00000463455 ORC2Q13416 577 aaPredicted RBP13.33□□□□□ -0.28
RTCB-202ENST00000463455 OTUD6AQ7L8S5 288 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms