RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 RABGGTAQ92696 567 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 MIEF2Q96C03 454 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 CLUHP3Q96NS8 147 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 VWA7Q9Y334 891 aa5.72□□□□□ -1.49
USH2A-203ENST00000463147 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.71□□□□□ -1.5
USH2A-203ENST00000463147 AQP7O14520 342 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 WNT9AO14904 365 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 PABPC1P11940 636 aaKnown RBP5.71□□□□□ -1.5
USH2A-203ENST00000463147 PDE6AP16499 860 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 KRT4P19013 534 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 ECE1P42892 770 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 SESN2P58004 480 aaPredicted RBP5.71□□□□□ -1.5
USH2A-203ENST00000463147 PABPC4Q13310 644 aaKnown RBP eCLIP5.71□□□□□ -1.5
USH2A-203ENST00000463147 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 GRAMD4Q6IC98 578 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 RAVER1Q8IY67 606 aaKnown RBP5.71□□□□□ -1.5
USH2A-203ENST00000463147 PRPF38AQ8NAV1 312 aaKnown RBP5.71□□□□□ -1.5
USH2A-203ENST00000463147 OR14K1Q8NGZ2 314 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 HAS1Q92839 578 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 NINJ1Q92982 152 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 OR10A5Q9H207 317 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 ARHGEF4Q9NR80 690 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 CHPF2Q9P2E5 772 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 CDC42EP3Q9UKI2 254 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 FAM184BQ9ULE4 1060 aa5.71□□□□□ -1.5
USH2A-203ENST00000463147 TRAV20A0A0B4J274 112 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 FAM83GA6ND36 823 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 GCP02774 474 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 NTRK3Q16288 839 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 CSRP2Q16527 193 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 SPTY2D1Q68D10 685 aaPredicted RBP5.7□□□□□ -1.5
USH2A-203ENST00000463147 GSPT2Q8IYD1 628 aaKnown RBP5.7□□□□□ -1.5
USH2A-203ENST00000463147 LRRC47Q8N1G4 583 aaKnown RBP5.7□□□□□ -1.5
USH2A-203ENST00000463147 SYNPOQ8N3V7 929 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 UBR7Q8N806 425 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 FBXW5Q969U6 566 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 TMEM176AQ96HP8 235 aa5.7□□□□□ -1.5
USH2A-203ENST00000463147 NAF1Q96HR8 494 aaKnown RBP5.7□□□□□ -1.5
USH2A-203ENST00000463147 THRAP3Q9Y2W1 955 aaKnown RBP5.7□□□□□ -1.5
USH2A-203ENST00000463147 A0A1W2PRX2 142 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 TCRBV5S4A2TA0A5A2 114 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 PRAMEF25A6NGN4 478 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 CLASP2O75122 1294 aaKnown RBP5.69□□□□□ -1.5
USH2A-203ENST00000463147 MAFO75444 373 aaPredicted RBP5.69□□□□□ -1.5
USH2A-203ENST00000463147 RAPGEF3O95398 923 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
USH2A-203ENST00000463147 SDSP20132 328 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 MAN2A2P49641 1150 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 COL10A1Q03692 680 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 RIN1Q13671 783 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 KANK2Q63ZY3 851 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 Q6ZPA2 131 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 MAMDC2Q7Z304 686 aaPredicted RBP5.69□□□□□ -1.5
USH2A-203ENST00000463147 RNF180Q86T96 592 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 DDX42Q86XP3 938 aaKnown RBP eCLIP5.69□□□□□ -1.5
USH2A-203ENST00000463147 NIM1KQ8IY84 436 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 OSBP2Q969R2 916 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 NCOA5Q9HCD5 579 aaKnown RBP5.69□□□□□ -1.5
USH2A-203ENST00000463147 CATSPERZQ9NTU4 200 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 BTBD7Q9P203 1132 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 PLAAQ9Y263 795 aa5.69□□□□□ -1.5
USH2A-203ENST00000463147 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 RFPL3O75679 317 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 STAT3P40763 770 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 ST5P78524 1137 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 MRPS21P82921 87 aaKnown RBP5.68□□□□□ -1.5
USH2A-203ENST00000463147 CD83Q01151 205 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 MOGSQ13724 837 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 CRY1Q16526 586 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 C16orf59Q7L2K0 433 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 CALML6Q8TD86 181 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 MFSD3Q96ES6 412 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 NRDE2Q9H7Z3 1164 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 TYW1Q9NV66 732 aaKnown RBP5.68□□□□□ -1.5
USH2A-203ENST00000463147 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
USH2A-203ENST00000463147 MAN2B1O00754 1011 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 C4BPAP04003 597 aaKnown RBP5.67□□□□□ -1.5
USH2A-203ENST00000463147 FSTL1Q12841 308 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 BRDTQ58F21 947 aaPredicted RBP5.67□□□□□ -1.5
USH2A-203ENST00000463147 FAM47CQ5HY64 1035 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
USH2A-203ENST00000463147 SYNE4Q8N205 404 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 LENG9Q96B70 501 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 DHRS4Q9BTZ2 278 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 GPRC5BQ9NZH0 403 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 PTGFRNQ9P2B2 879 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 MRPS23Q9Y3D9 190 aaKnown RBP5.67□□□□□ -1.5
USH2A-203ENST00000463147 SH3BP1Q9Y3L3 701 aa5.67□□□□□ -1.5
USH2A-203ENST00000463147 H2AFYO75367 372 aaKnown RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 NUDT3O95989 172 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 S100BP04271 92 aaPredicted RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 APPP05067 770 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 STRA8Q7Z7C7 330 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 SLC25A43Q8WUT9 341 aaPredicted RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 AMNQ9BXJ7 453 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms