RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
MSH5-211ENST00000463144 IRF6O14896 467 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 PJA2O43164 708 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 SORBS3O60504 671 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ZSCAN20P17040 1043 aaPredicted RBP11.12□□□□□ -0.63
MSH5-211ENST00000463144 PEX3P56589 373 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 GTF2BQ00403 316 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ARID5AQ03989 594 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 GJB7Q6PEY0 223 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 RDH13Q8NBN7 331 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ST6GALNAC4Q9H4F1 302 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CSADQ9Y600 493 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 A0A087X0T9 212 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 SLC16A4O15374 487 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 FAM228BP0C875 321 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TRIM49P0CI25 452 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TRIM49CP0CI26 452 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CBWD6Q4V339 395 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CBWD3Q5JTY5 395 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CBWD5Q5RIA9 395 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TEX35Q5T0J7 233 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 PAPD7Q5XG87 772 aaKnown RBP11.12□□□□□ -0.63
MSH5-211ENST00000463144 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ABHD15Q6UXT9 468 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
MSH5-211ENST00000463144 CHST13Q8NET6 341 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 GOLGA5Q8TBA6 731 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TMEM174Q8WUU8 243 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 DRC1Q96MC2 740 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ACCSQ96QU6 501 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TIPINQ9BVW5 301 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CCDC94Q9BW85 323 aaPredicted RBP11.12□□□□□ -0.63
MSH5-211ENST00000463144 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 MAF1Q9H063 256 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 ZNF446Q9NWS9 450 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 SLC9A2Q9UBY0 812 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 CAPN6Q9Y6Q1 641 aa11.12□□□□□ -0.63
MSH5-211ENST00000463144 A0A0G2JLL6 359 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 EXOC3O60645 756 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 STAM2O75886 525 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 FMO5P49326 533 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 SOX10P56693 466 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 JAM2P57087 298 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CHMP4BP1P59074 171 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ACTR2P61160 394 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 SP4Q02446 784 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ALCAMQ13740 583 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 MYBPC2Q14324 1141 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ASIC2Q16515 512 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 GADL1Q6ZQY3 521 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 PRRT2Q7Z6L0 340 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 RIOX2Q8IUF8 465 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CEP112Q8N8E3 955 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 IWS1Q96ST2 819 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 PDLIM7Q9NR12 457 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 FBXL5Q9UKA1 691 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 MYH10P35580 1976 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 SOWAHBA6NEL2 793 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CNMDO75829 334 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 MOCS3O95396 460 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 PSAPP07602 524 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 CLCN6P51797 869 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 DLG4P78352 724 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 PTK2Q05397 1052 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 PPATQ06203 517 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ENOX2Q16206 610 aaKnown RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 WHAMMP3Q1A5X7 153 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ANKRD35Q8N283 1001 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 DNERQ8NFT8 737 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 ZNF526Q8TF50 670 aaPredicted RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 CEP170P1Q96L14 293 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms