RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 MIS18BP1Q6P0N0 1132 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 NIPA1Q7RTP0 329 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 ECHDC2Q86YB7 292 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 RNF169Q8NCN4 708 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 PRRX2Q99811 253 aa17.8■□□□□ 0.44
SND1-203ENST00000463020 ZNF862O60290 1169 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 AP3B2Q13367 1082 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 DRP2Q13474 957 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 TMC7Q7Z402 723 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 ZNF598Q86UK7 904 aaKnown RBP17.79■□□□□ 0.44
SND1-203ENST00000463020 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 HELQQ8TDG4 1101 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 BCL7CQ8WUZ0 217 aaPredicted RBP17.79■□□□□ 0.44
SND1-203ENST00000463020 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
SND1-203ENST00000463020 GJA10Q969M2 543 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 LENG9Q96B70 501 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 ZNF558Q96NG5 402 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 FRYLO94915 3013 aa17.79■□□□□ 0.44
SND1-203ENST00000463020 CYP3A4P08684 503 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 EFCAB12Q6NXP0 572 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 LRRC43Q8N309 656 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 MRPL43Q8N983 215 aaKnown RBP17.78■□□□□ 0.44
SND1-203ENST00000463020 ZNF577Q9BSK1 485 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 ADAM7Q9H2U9 754 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 NGRNQ9NPE2 291 aaKnown RBP17.78■□□□□ 0.44
SND1-203ENST00000463020 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
SND1-203ENST00000463020 DMXL1Q9Y485 3027 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 GOLGA8AA7E2F4 631 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 ZBTB43O43298 467 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
SND1-203ENST00000463020 B4GALT3O60512 393 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 CPA1P15085 419 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 EPCAMP16422 314 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.446e-11■□□□□ 9.8
SND1-203ENST00000463020 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
SND1-203ENST00000463020 RARS2Q5T160 578 aaKnown RBP17.77■□□□□ 0.44
SND1-203ENST00000463020 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
SND1-203ENST00000463020 KLF18A0A0U1RQI7 1052 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 TMEM150BA6NC51 233 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 MEIS3P2A8K0S8 358 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 HOXB8P17481 243 aaPredicted RBP17.76■□□□□ 0.43
SND1-203ENST00000463020 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
SND1-203ENST00000463020 GPC3P51654 580 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 PRR16Q569H4 304 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
SND1-203ENST00000463020 CASP10Q92851 521 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 LPPQ93052 612 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 PUF60Q9UHX1 559 aaKnown RBP17.76■□□□□ 0.43
SND1-203ENST00000463020 SORCS3Q9UPU3 1222 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 DNAH14Q0VDD8 3507 aa17.76■□□□□ 0.43
SND1-203ENST00000463020 RIF1Q5UIP0 2472 aaKnown RBP17.75■□□□□ 0.43
SND1-203ENST00000463020 MYO10Q9HD67 2058 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 FSD2A1L4K1 749 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 SRGAP2BP0DMP2 458 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 DARSP14868 501 aaKnown RBP17.75■□□□□ 0.43
SND1-203ENST00000463020 EIF4BP23588 611 aaKnown RBP17.75■□□□□ 0.43
SND1-203ENST00000463020 BCAR1P56945 870 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
SND1-203ENST00000463020 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
SND1-203ENST00000463020 ODR4Q5SWX8 454 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 SH2D3AQ9BRG2 576 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 PCDHA10Q9Y5I2 948 aa17.75■□□□□ 0.43
SND1-203ENST00000463020 WDR81Q562E7 1941 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 A0A0U1RQF3 1178 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 PROB1E7EW31 1015 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 PSAPP07602 524 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 CA8P35219 290 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 PPM1AP35813 382 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 PRKCEQ02156 737 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 KRT17Q04695 432 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 CWF19L1Q69YN2 538 aaKnown RBP17.74■□□□□ 0.43
SND1-203ENST00000463020 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 ABI1Q8IZP0 508 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 TBC1D22BQ9NU19 505 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 LIMD1Q9UGP4 676 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 NR2E1Q9Y466 385 aa17.74■□□□□ 0.43
SND1-203ENST00000463020 GVINP1Q7Z2Y8 2422 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
SND1-203ENST00000463020 ZNF292O60281 2723 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 hCG_1984214I3L0E3 225 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 MSH4O15457 936 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 HOXA2O43364 376 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 CXCL14O95715 111 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 OATP04181 439 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 FRMD5Q7Z6J6 570 aa17.73■□□□□ 0.43
SND1-203ENST00000463020 SMAP1Q8IYB5 467 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms