RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 MILR1Q7Z6M3 343 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 TRIM48Q8IWZ4 208 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 PHOSPHO1Q8TCT1 267 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 NRG4Q8WWG1 115 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 SEC14L1Q92503 715 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 MAML3Q96JK9 1138 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 CGRRF1Q99675 332 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 NAP1L4Q99733 375 aaKnown RBP4.74□□□□□ -1.65
GPNMB-205ENST00000463011 PLCD4Q9BRC7 762 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 HERPUD2Q9BSE4 406 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 LRFN3Q9BTN0 628 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 ACE2Q9BYF1 805 aaPredicted RBP4.74□□□□□ -1.65
GPNMB-205ENST00000463011 WNT8AQ9H1J5 351 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 RTEL1Q9NZ71 1219 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 SLAMF8Q9P0V8 285 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 ACSL6Q9UKU0 697 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 PALD1Q9ULE6 856 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 L1RE1Q9UN81 338 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 ASB1Q9Y576 335 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 NUMBLQ9Y6R0 609 aa4.74□□□□□ -1.65
GPNMB-205ENST00000463011 RNF225M0QZC1 329 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 GOLIM4O00461 696 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 HTRA2O43464 458 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 PIP5K1CO60331 668 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 PEX2P28328 305 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 HERVK_113P62684 666 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 BNIP3Q12983 259 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 C3orf36Q3SXR2 165 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 PAN2Q504Q3 1202 aaKnown RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 KIAA1841Q6NSI8 718 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 CABP7Q86V35 215 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 DCP2Q8IU60 420 aaKnown RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 SMAP1Q8IYB5 467 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 ARRDC4Q8NCT1 418 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 POF1BQ8WVV4 589 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 PGBD4Q96DM1 585 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 SGCZQ96LD1 299 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 AP5M1Q9H0R1 490 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 RSAD1Q9HA92 442 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 UCKL1Q9NWZ5 548 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 LUZP4Q9P127 313 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 PIM2Q9P1W9 311 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 VAV3Q9UKW4 847 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 USP18Q9UMW8 372 aa4.73□□□□□ -1.65
GPNMB-205ENST00000463011 MORC2Q9Y6X9 1032 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-205ENST00000463011 MYPNQ86TC9 1320 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CAPN8A6NHC0 703 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 BTBD11A6QL63 1104 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 HMGB1P1B2RPK0 211 aaPredicted RBP4.72□□□□□ -1.65
GPNMB-205ENST00000463011 NFIBO00712 420 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PCDH8O95206 1070 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 GDF11O95390 407 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PRLP01236 227 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PFKMP08237 780 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 GLI4P10075 376 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 FSTP19883 344 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 MC4RP32245 332 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 TM4SF4P48230 202 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 RGS3P49796 1198 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 HK2P52789 917 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CACNB3P54284 484 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CYP4F8P98187 520 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 ROM1Q03395 351 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 IFIT5Q13325 482 aaKnown RBP4.72□□□□□ -1.65
GPNMB-205ENST00000463011 IL10RAQ13651 578 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 TRIM14Q14142 442 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 SPIDRQ14159 915 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CNN3Q15417 329 aaKnown RBP4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CPSF6Q16630 551 aaKnown RBP eCLIP4.72□□□□□ -1.65
GPNMB-205ENST00000463011 SLFN12LQ6IEE8 588 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 KANSL1Q7Z3B3 1105 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 DAAM2Q86T65 1068 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 TICAM2Q86XR7 235 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 CPXCR1Q8N123 301 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PAF1Q8N7H5 531 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 ANKS4BQ8N8V4 417 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 DPF2Q92785 391 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 FATE1Q969F0 183 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
GPNMB-205ENST00000463011 BTBD7Q9P203 1132 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 PRSS50Q9UI38 385 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 IPPQ9Y573 584 aa4.72□□□□□ -1.65
GPNMB-205ENST00000463011 ZC3H12DA2A288 527 aaKnown RBP4.71□□□□□ -1.66
GPNMB-205ENST00000463011 CFAP69A5D8W1 941 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 NOTOA8MTQ0 251 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 GSC2O15499 205 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 CELA3BP08861 270 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 GSPT1P15170 499 aaKnown RBP4.71□□□□□ -1.66
GPNMB-205ENST00000463011 FOSL1P15407 271 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 FAHP16930 419 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 AOAHP28039 575 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 PIK3CBP42338 1070 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 AGFG1P52594 562 aaKnown RBP4.71□□□□□ -1.66
GPNMB-205ENST00000463011 ZP2Q05996 745 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 POU5F1BQ06416 359 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 PPARAQ07869 468 aa4.71□□□□□ -1.66
GPNMB-205ENST00000463011 DBPQ10586 325 aaPredicted RBP4.71□□□□□ -1.66
GPNMB-205ENST00000463011 NOLC1Q14978 699 aaKnown RBP eCLIP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms