RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 USP11P51784 963 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-204ENST00000462475 DUSP6Q16828 381 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 TBCKQ8TEA7 893 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 CASD1Q96PB1 797 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 SH3GLB2Q9NR46 395 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 NRBP2Q9NSY0 501 aa18.17■□□□□ 0.5
COL7A1-204ENST00000462475 REC8O95072 547 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 TDP2O95551 362 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 DARSP14868 501 aaKnown RBP18.16■□□□□ 0.5
COL7A1-204ENST00000462475 FGFR4P22455 802 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 PBX3P40426 434 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 JAK3P52333 1124 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 DRP2Q13474 957 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 PLPP4Q5VZY2 271 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 ECHDC2Q86YB7 292 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 SCLT1Q96NL6 688 aa18.16■□□□□ 0.5
COL7A1-204ENST00000462475 MYH9P35579 1960 aaKnown RBP18.16■□□□□ 0.5
COL7A1-204ENST00000462475 TMEM150BA6NC51 233 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 HOXA2O43364 376 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 PSMD10O75832 226 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 ZSCAN20P17040 1043 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 SFNP31947 248 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 PLCB3Q01970 1234 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 TBC1D8BQ0IIM8 1120 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 TARBP2Q15633 366 aaKnown RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 CLLU1OSQ5K130 101 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 MRPS27Q92552 414 aaKnown RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 CDCA3Q99618 268 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 TCF25Q9BQ70 676 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 LARP6Q9BRS8 491 aaKnown RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 SEPT9Q9UHD8 586 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-204ENST00000462475 PCDHA4Q9UN74 947 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 LZTS1Q9Y250 596 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 PIEZO1Q92508 2521 aa18.15■□□□□ 0.5
COL7A1-204ENST00000462475 CSDE1O75534 798 aaKnown RBP18.14■□□□□ 0.49
COL7A1-204ENST00000462475 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-204ENST00000462475 SSRP1Q08945 709 aaKnown RBP18.14■□□□□ 0.49
COL7A1-204ENST00000462475 NPY5RQ15761 445 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 MTERF2Q49AM1 385 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 Q4G0T1 1027 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 PDE12Q6L8Q7 609 aaKnown RBP18.14■□□□□ 0.49
COL7A1-204ENST00000462475 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 B3GNT9Q6UX72 402 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 MIER3Q7Z3K6 550 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 TRIM22Q8IYM9 498 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 ABI1Q8IZP0 508 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 ZNF710Q8N1W2 664 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 ZNF558Q96NG5 402 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 AIFM3Q96NN9 605 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 SH2D3AQ9BRG2 576 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 ENTPD7Q9NQZ7 604 aa18.14■□□□□ 0.49
COL7A1-204ENST00000462475 HIDE1A8MVS5 230 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 M0R2N6 131 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 STBD1O95210 358 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 KCNC3Q14003 757 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-204ENST00000462475 ZNF598Q86UK7 904 aaKnown RBP18.13■□□□□ 0.49
COL7A1-204ENST00000462475 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 RDM1Q8NG50 284 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 HELQQ8TDG4 1101 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 SUSD6Q92537 303 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 EDAQ92838 391 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 PHF7Q9BWX1 381 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-204ENST00000462475 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
COL7A1-204ENST00000462475 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 A0A0U1RQF3 1178 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 DEXIO95424 95 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 CYP3A7P24462 503 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 PPM1AP35813 382 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 XKR3Q5GH77 459 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 DAGLBQ8NCG7 672 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 ETNPPLQ8TBG4 499 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 RPGRIP1Q96KN7 1286 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 FBXL18Q96ME1 805 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 MBOAT7Q96N66 472 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 NIFKQ9BYG3 293 aaKnown RBP18.12■□□□□ 0.49
COL7A1-204ENST00000462475 PUF60Q9UHX1 559 aaKnown RBP18.12■□□□□ 0.49
COL7A1-204ENST00000462475 TECTAO75443 2155 aa18.12■□□□□ 0.49
COL7A1-204ENST00000462475 WDR81Q562E7 1941 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 CPLX1O14810 134 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 TECP42680 631 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 STK3Q13188 491 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 ANKRD54Q6NXT1 300 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 LLGL2Q6P1M3 1020 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 TMEM184AQ6ZMB5 413 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 SLC39A11Q8N1S5 342 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 APOL5Q9BWW9 433 aa18.11■□□□□ 0.49
COL7A1-204ENST00000462475 GCOM2Q9BZD3 368 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-204ENST00000462475 S1PR5Q9H228 398 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms