RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 HNRNPRO43390 633 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 EFHBQ8N7U6 833 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 MB21D1Q8N884 522 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 RUBCNLQ9H714 662 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ABCC4O15439 1325 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 JAK3P52333 1124 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 TSPY1Q01534 308 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SLC7A5Q01650 507 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 AP1B1Q10567 949 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 RBBP7Q16576 425 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 NAALADL2Q58DX5 795 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ZMYM1Q5SVZ6 1142 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 CATSPER3Q86XQ3 398 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 TBC1D19Q8N5T2 526 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 MXD3Q9BW11 206 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 DHX36Q9H2U1 1008 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ADAM22Q9P0K1 906 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 MRFAP1Q9Y605 127 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PPEF1O14829 653 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ABCE1P61221 599 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ARHGAP27Q6ZUM4 889 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 C11orf57Q6ZUT1 292 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 GRAMD1AQ96CP6 724 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 FAM167AQ96KS9 214 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SRPRBQ9Y5M8 271 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 INSRP06213 1382 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 K7ERI5 159 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PIK3R2O00459 728 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 NEMP1O14524 444 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PRPF3O43395 683 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 OSTNP61366 133 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 KIF23Q02241 960 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 INPP5AQ14642 412 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PPP6R3Q5H9R7 873 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PDXDC2PQ6P474 469 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 KCTD1Q719H9 257 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 CDKL3Q8IVW4 592 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 KIRREL3Q8IZU9 778 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 CCNYL1Q8N7R7 359 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SH3KBP1Q96B97 665 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 EAF2Q96CJ1 260 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 DTNBP1Q96EV8 351 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 FAM161BQ96MY7 647 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 YIPF3Q9GZM5 350 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SLITRK6Q9H5Y7 841 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 STMN3Q9NZ72 180 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PKD2L2Q9NZM6 624 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 CEP72Q9P209 647 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 UHRF1BP1Q6BDS2 1440 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SYNDIG1LA6NDD5 238 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 C16orf96A6NNT2 1141 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PSMA3P25788 255 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ARL6IP4Q66PJ3 421 aaKnown RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ZNF555Q8NEP9 628 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 SH3TC2Q8TF17 1288 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 PIGSQ96S52 555 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 OLFML3Q9NRN5 406 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 TOPORSQ9NS56 1045 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-205ENST00000461221 ANAPC7Q9UJX3 599 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 TBX22Q9Y458 520 aa9.58□□□□□ -0.88
BRCA1-205ENST00000461221 DPYSL4O14531 572 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DIAPH2O60879 1101 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DTNBO60941 627 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 GNAT1P11488 350 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TRADDQ15628 312 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TTC39CQ8N584 583 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 B4GALNT2Q8NHY0 566 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 MAP4K1Q92918 833 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 EEF2KMTQ96G04 330 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 SYTL2Q9HCH5 934 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 CNOT8Q9UFF9 292 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 STAP1Q9ULZ2 295 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PMS2P54278 862 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 GPC5P78333 572 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 LLGL1Q15334 1064 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 LRRC8EQ6NSJ5 796 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 CARD14Q9BXL6 1004 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 LSG1Q9H089 658 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DDX56Q9NY93 547 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 MPP6Q9NZW5 540 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 ANO9A1A5B4 782 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 GRID2IPA4D2P6 1211 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 GOLGA8JA6NMD2 632 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 MFAP3LO75121 409 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 KRT16P08779 473 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 KITP10721 976 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 KCNA2P16389 499 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PLCG1P19174 1290 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 ADCK1Q86TW2 530 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 SPICE1Q8N0Z3 855 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms