RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 IFT122Q9HBG6 1241 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 GPRC5CQ9NQ84 441 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 CHMP5Q9NZZ3 219 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 CDY2AQ9Y6F7 541 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 TRANK1O15050 2925 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 RSPH10B2B2RC85 870 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 VTNP04004 478 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CTSHP09668 335 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 PLA2G4BP0C869 781 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 RSPH10BP0C881 870 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 RAG1P15918 1043 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 GLRA2P23416 452 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CMA1P23946 247 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 ZNF131P52739 623 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 FPGSQ05932 587 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CAPSQ13938 189 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 AMHR2Q16671 573 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 PLEKHG4Q58EX7 1191 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 C9orf50Q5SZB4 431 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CDCA2Q69YH5 1023 aaPredicted RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 RINT1Q6NUQ1 792 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CNNM4Q6P4Q7 775 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 OTUD6AQ7L8S5 288 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 TRMT1LQ7Z2T5 733 aaKnown RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 PRPF31Q8WWY3 499 aaKnown RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 TMEM143Q96AN5 459 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 FIZ1Q96SL8 496 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 CELF4Q9BZC1 486 aaKnown RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
SND1-202ENST00000461056 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 TMX1Q9H3N1 280 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 MINDY3Q9H8M7 445 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 ATP6V0A4Q9HBG4 840 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 IL23AQ9NPF7 189 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 DNM3Q9UQ16 869 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 ATP6V1DQ9Y5K8 247 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 TRPV2Q9Y5S1 764 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 SQORQ9Y6N5 450 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 WDR81Q562E7 1941 aa9.09□□□□□ -0.95
SND1-202ENST00000461056 ADGRA3Q8IWK6 1321 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 SIP14410 1827 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 COL4A6Q14031 1691 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 FRMD3A2A2Y4 597 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 ACTN4O43707 911 aaKnown RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 USO1O60763 962 aaKnown RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 PARNO95453 639 aaKnown RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 PFKMP08237 780 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 DARSP14868 501 aaKnown RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 UBA7P41226 1012 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 CRYBB1P53674 252 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 POLGP54098 1239 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 POU5F1BQ06416 359 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 TMEM62Q0P6H9 643 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 LAMTOR4Q0VGL1 99 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.963e-11■■□□□ 12.7
SND1-202ENST00000461056 DSC3Q14574 896 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 KIZQ2M2Z5 673 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 IER5Q5VY09 327 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 ADALQ6DHV7 355 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 TSHZ1Q6ZSZ6 1077 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 FAM228AQ86W67 206 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 KSR1Q8IVT5 923 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 ZNF710Q8N1W2 664 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 RETREG2Q8NC44 543 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 MCPH1Q8NEM0 835 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 ENGASEQ8NFI3 743 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 SLC7A3Q8WY07 619 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 HERVK_113Q902F9 699 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 DNAJC19Q96DA6 116 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 SPATA32Q96LK8 384 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 PLIN2Q99541 437 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 JPH2Q9BR39 696 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.961e-13■□□□□ 11
SND1-202ENST00000461056 NFKBIZQ9BYH8 718 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 CCDC113Q9H0I3 377 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 ERVK-5Q9HDB9 667 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 KBTBD4Q9NVX7 518 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 KCND2Q9NZV8 630 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 CXXC1Q9P0U4 656 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 SUCLA2Q9P2R7 463 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 STK17AQ9UEE5 414 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 NOC2LQ9Y3T9 749 aaKnown RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 COL4A3BPQ9Y5P4 624 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 TET1Q8NFU7 2136 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 TRIP12Q14669 1992 aaPredicted RBP9.08□□□□□ -0.96
SND1-202ENST00000461056 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
SND1-202ENST00000461056 NPHP3-ACAD11A0A0J9YXS1 232 aa9.07□□□□□ -0.96
SND1-202ENST00000461056 ARHGEF35A5YM69 484 aa9.07□□□□□ -0.96
SND1-202ENST00000461056 MYMKA6NI61 221 aa9.07□□□□□ -0.96
SND1-202ENST00000461056 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
SND1-202ENST00000461056 MGEA5O60502 916 aa9.07□□□□□ -0.96
SND1-202ENST00000461056 EDN1P05305 212 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms