RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 KCNK18Q7Z418 384 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 RHPN2Q8IUC4 686 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 KSR1Q8IVT5 923 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 PHOSPHO2Q8TCD6 241 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 SLC9A7Q96T83 725 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 MTRQ99707 1265 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 TMX1Q9H3N1 280 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 ERVK-5Q9HDB9 667 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 TFIP11Q9UBB9 837 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 CHD9Q3L8U1 2897 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 RPS6KA5O75582 802 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 ATP2A2P16615 1042 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 EIF4BP23588 611 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 GRB10Q13322 594 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 FAM228AQ86W67 206 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 LINC00301Q8NCQ3 95 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 PSPC1Q8WXF1 523 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 CCDC43Q96MW1 224 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 ZNF396Q96N95 335 aaPredicted RBP22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 ATP6V0A4Q9HBG4 840 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 COL4A3BPQ9Y5P4 624 aa22.95■■□□□ 1.26
RPUSD3-210ENST00000460909 E9PMD0 336 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 USO1O60763 962 aaKnown RBP22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 DARSP14868 501 aaKnown RBP22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 ARL2P36404 184 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 KCNJ6P48051 423 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 PAK2Q13177 524 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 PADI6Q6TGC4 694 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 RTN4RL1Q86UN2 441 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 CABP7Q86V35 215 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 ZNF410Q86VK4 478 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 KCTD17Q8N5Z5 321 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 TCP11Q8WWU5 503 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 LINC01599Q8WXQ3 324 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 CSRNP2Q9H175 543 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 BHMT2Q9H2M3 363 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 ST3GAL5Q9UNP4 418 aa22.94■■□□□ 1.26
RPUSD3-210ENST00000460909 A0A087WZ62 844 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 ENPP3O14638 875 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 SLC26A4O43511 780 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 EYA4O95677 639 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 PBX2P40425 430 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 LAMTOR4Q0VGL1 99 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 TMEM119Q4V9L6 283 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 GPR153Q6NV75 609 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 TMCO2Q7Z6W1 182 aaPredicted RBP22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 HERC6Q8IVU3 1022 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 NLRP7Q8WX94 980 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 CLIC6Q96NY7 704 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 FDXACB1Q9BRP7 624 aaPredicted RBP22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 PBX4Q9BYU1 374 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 IFT122Q9HBG6 1241 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 DNM3Q9UQ16 869 aa22.93■■□□□ 1.26
RPUSD3-210ENST00000460909 ARHGEF35A5YM69 484 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 GPR182O15218 404 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 ASAP2O43150 1006 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 CYP11B2P19099 503 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 DDIT3P35638 169 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 UBA7P41226 1012 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 RABGGTBP53611 331 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 NFX1Q12986 1120 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 FOXD4L6Q3SYB3 417 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 FOXD4L3Q6VB84 417 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 FAM43BQ6ZT52 329 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 USP49Q70CQ1 688 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 ASAP3Q8TDY4 903 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 LRRC15Q8TF66 581 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 FTHL17Q9BXU8 183 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 CCSER1Q9C0I3 900 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 NT5C3AQ9H0P0 336 aa22.92■■□□□ 1.26
RPUSD3-210ENST00000460909 TTC3P53804 2025 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 MGEA5O60502 916 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 CSDE1O75534 798 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 YEATS4O95619 227 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 ZRSR1Q15695 479 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 SPECC1Q5M775 1068 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 ATL3Q6DD88 541 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 MCPH1Q8NEM0 835 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 EPSTI1Q96J88 318 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 NLRP4Q96MN2 994 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 SCLT1Q96NL6 688 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 PLIN2Q99541 437 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 GCOM2Q9BZD3 368 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 TSPYL2Q9H2G4 693 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 GPRC5CQ9NQ84 441 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 DAXXQ9UER7 740 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 YBX2Q9Y2T7 364 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 CDH23Q9H251 3354 aa22.91■■□□□ 1.26
RPUSD3-210ENST00000460909 SPTLC2O15270 562 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 PPP6R2O75170 966 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 GJB5O95377 273 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 AMHP03971 560 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 SRGAP2CP0DJJ0 459 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 GLRA2P23416 452 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 DNAJB2P25686 324 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 DNM1Q05193 864 aaKnown RBP22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 DSC3Q14574 896 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 MXD4Q14582 209 aaPredicted RBP22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 STK38Q15208 465 aa22.9■■□□□ 1.26
RPUSD3-210ENST00000460909 ODR4Q5SWX8 454 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms