RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 COL20A1Q9P218 1284 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 MRPL11Q9Y3B7 192 aaKnown RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 SLC16A3O15427 465 aaKnown RBP19.76■□□□□ 0.75
HPS3-202ENST00000460120 ITGB5P18084 799 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 ARHGAP27Q6ZUM4 889 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 VPS36Q86VN1 386 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 VCPKMTQ9H867 229 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 CWC15Q9P013 229 aaKnown RBP19.76■□□□□ 0.75
HPS3-202ENST00000460120 SLC26A4O43511 780 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
HPS3-202ENST00000460120 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
HPS3-202ENST00000460120 ITGA4P13612 1032 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 USP8P40818 1118 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 STAT1P42224 750 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 GALCP54803 685 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 PPP2R5CQ13362 524 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 C10orf67Q8IYJ2 551 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 TPCN2Q8NHX9 752 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 FAM151AQ8WW52 585 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 NACC1Q96RE7 527 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 RANBP17Q9H2T7 1088 aaKnown RBP19.76■□□□□ 0.75
HPS3-202ENST00000460120 TAS2R14Q9NYV8 317 aa19.76■□□□□ 0.75
HPS3-202ENST00000460120 ALAS1P13196 640 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 JAM2P57087 298 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 TTMPQ5BVD1 217 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 PALB2Q86YC2 1186 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 METTL13Q8N6R0 699 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 FIZ1Q96SL8 496 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 CNTNAP1P78357 1384 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 F8VZ95 297 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 COPB2P35606 906 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 NBPF9Q3BBW0 867 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 MUM1L1Q5H9M0 696 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 MIER3Q7Z3K6 550 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 BORCS6Q96GS4 357 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 INTS2Q9H0H0 1204 aaKnown RBP19.75■□□□□ 0.75
HPS3-202ENST00000460120 BZW2Q9Y6E2 419 aaKnown RBP19.75■□□□□ 0.75
HPS3-202ENST00000460120 IGSF9BQ9UPX0 1349 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 IRX5P78411 483 aaPredicted RBP19.75■□□□□ 0.75
HPS3-202ENST00000460120 MYL7Q01449 175 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 EMBQ6PCB8 327 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 PADI6Q6TGC4 694 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 NOC2LQ9Y3T9 749 aaKnown RBP19.75■□□□□ 0.75
HPS3-202ENST00000460120 STK24Q9Y6E0 443 aa19.75■□□□□ 0.75
HPS3-202ENST00000460120 EIF2AK2P19525 551 aaKnown RBP19.74■□□□□ 0.75
HPS3-202ENST00000460120 LRRC57Q8N9N7 239 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 TRIM31Q9BZY9 425 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 RAVER2Q9HCJ3 691 aaKnown RBP19.74■□□□□ 0.75
HPS3-202ENST00000460120 GPRC5CQ9NQ84 441 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 GOLGA8IPA6NC78 632 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 GOLGA8JA6NMD2 632 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 SORBS3O60504 671 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 MYCLP12524 364 aaPredicted RBP19.74■□□□□ 0.75
HPS3-202ENST00000460120 SOX5P35711 763 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 TNNC1P63316 161 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
HPS3-202ENST00000460120 PAK2Q13177 524 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 CFAP58Q5T655 872 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 ZNF746Q6NUN9 644 aaPredicted RBP19.74■□□□□ 0.75
HPS3-202ENST00000460120 DAW1Q8N136 415 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 KCNH7Q9NS40 1196 aa19.74■□□□□ 0.75
HPS3-202ENST00000460120 FRMPD4Q14CM0 1322 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 TMEM110-MUSTN1A8MSY1 372 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 KRIT1O00522 736 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 EIF3DO15371 548 aaKnown RBP eCLIP19.73■□□□□ 0.75
HPS3-202ENST00000460120 GDF3Q9NR23 364 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 FERP16591 822 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 GCLMP48507 274 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 ERVK-9P63128 1117 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 ZNF211Q13398 564 aaPredicted RBP19.73■□□□□ 0.75
HPS3-202ENST00000460120 MAATS1Q7Z4T9 603 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 OR2W6PQ8NHA6 318 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 SLC20A1Q8WUM9 679 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 ARHGEF26Q96DR7 871 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 CBWD1Q9BRT8 395 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 CELF4Q9BZC1 486 aaKnown RBP19.73■□□□□ 0.75
HPS3-202ENST00000460120 EHMT1Q9H9B1 1298 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 AMACRQ9UHK6 382 aa19.73■□□□□ 0.75
HPS3-202ENST00000460120 CAP2P40123 477 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 PRKCIP41743 596 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 GNGT1P63211 74 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 PHLDB3Q6NSJ2 640 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 SLC35G2Q8TBE7 412 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 MXRA8Q9BRK3 442 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 ACP6Q9NPH0 428 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 RNF14Q9UBS8 474 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 RRP15Q9Y3B9 282 aaKnown RBP19.72■□□□□ 0.75
HPS3-202ENST00000460120 BUB1BO60566 1050 aaPredicted RBP19.72■□□□□ 0.75
HPS3-202ENST00000460120 GLE1Q53GS7 698 aaKnown RBP19.72■□□□□ 0.75
HPS3-202ENST00000460120 SUPT20HQ8NEM7 779 aa19.72■□□□□ 0.75
HPS3-202ENST00000460120 FOXN3O00409 490 aaPredicted RBP19.71■□□□□ 0.75
HPS3-202ENST00000460120 IFI16Q16666 785 aaKnown RBP19.71■□□□□ 0.75
HPS3-202ENST00000460120 SPDYE2Q495Y8 402 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 KIFC3Q9BVG8 833 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 THAP2Q9H0W7 228 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 DPH5Q9H2P9 285 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 UBE2TQ9NPD8 197 aaPredicted RBP19.71■□□□□ 0.75
HPS3-202ENST00000460120 EMSYQ7Z589 1322 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 MAPK7Q13164 816 aa19.71■□□□□ 0.75
HPS3-202ENST00000460120 ITGB3BPQ13352 177 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms