RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 KCNA5P22460 613 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 QARSP47897 775 aaKnown RBP23.44■■□□□ 1.34
SRM-202ENST00000459997 DNM2P50570 870 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 ST3GAL1Q11201 340 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 FAM102BQ5T8I3 360 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 PLA2G4FQ68DD2 849 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 P2RX5Q93086 422 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 ALG13Q9NP73 1137 aaKnown RBP23.44■■□□□ 1.34
SRM-202ENST00000459997 PLAGL2Q9UPG8 496 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 FNDC1Q4ZHG4 1894 aaPredicted RBP23.43■■□□□ 1.34
SRM-202ENST00000459997 BDP1A6H8Y1 2624 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 IGKV6-21A0A0C4DH24 114 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 TBKBP1A7MCY6 615 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 BTBD18B2RXH4 712 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 DKC1O60832 514 aaKnown RBP eCLIP23.43■■□□□ 1.34
SRM-202ENST00000459997 BAG4O95429 457 aaKnown RBP23.43■■□□□ 1.34
SRM-202ENST00000459997 P4HBP07237 508 aaKnown RBP23.43■■□□□ 1.34
SRM-202ENST00000459997 ZSCAN20P17040 1043 aaPredicted RBP23.43■■□□□ 1.34
SRM-202ENST00000459997 DIS3L2Q8IYB7 885 aaKnown RBP23.43■■□□□ 1.34
SRM-202ENST00000459997 SLFN12Q8IYM2 578 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 ATP6V0A4Q9HBG4 840 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 TMEM161AQ9NX61 479 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
SRM-202ENST00000459997 MAFO75444 373 aaPredicted RBP23.42■■□□□ 1.34
SRM-202ENST00000459997 FGFR1P11362 822 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 FGFR4P22455 802 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 FAM189BP81408 668 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 NAALADL2Q58DX5 795 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 SPOUT1Q5T280 376 aaKnown RBP23.42■■□□□ 1.34
SRM-202ENST00000459997 NCAPH2Q6IBW4 605 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 KLHL23Q8NBE8 558 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 ELAC1Q9H777 363 aaKnown RBP23.42■■□□□ 1.34
SRM-202ENST00000459997 CYP26B1Q9NR63 512 aa23.42■■□□□ 1.34
SRM-202ENST00000459997 WRAP73Q9P2S5 460 aaPredicted RBP23.42■■□□□ 1.34
SRM-202ENST00000459997 ITGB1P05556 798 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 CDC42EP1Q00587 391 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 EPHA7Q15375 998 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 LEXMQ3ZCV2 418 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 EP400NLQ6ZTU2 488 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 JPH2Q9BR39 696 aaPredicted RBP23.41■■□□□ 1.34
SRM-202ENST00000459997 LXNQ9BS40 222 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 GCOM2Q9BZD3 368 aaPredicted RBP23.41■■□□□ 1.34
SRM-202ENST00000459997 SUCLA2Q9P2R7 463 aaPredicted RBP23.41■■□□□ 1.34
SRM-202ENST00000459997 BRWD1Q9NSI6 2320 aa23.41■■□□□ 1.34
SRM-202ENST00000459997 CSDE1O75534 798 aaKnown RBP23.4■■□□□ 1.34
SRM-202ENST00000459997 NPEPPSP55786 919 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 SPIRE1Q08AE8 756 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 RHPN2Q8IUC4 686 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 CCDC83Q8IWF9 413 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 PABPC5Q96DU9 382 aaKnown RBP23.4■■□□□ 1.34
SRM-202ENST00000459997 CEP170P1Q96L14 293 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 RGL1Q9NZL6 768 aa23.4■■□□□ 1.34
SRM-202ENST00000459997 A0A087WZ62 844 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 DNAJB1P25685 340 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 CAMK1Q14012 370 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 COL19A1Q14993 1142 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 CALCRLQ16602 461 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 ZNF579Q8NAF0 562 aaKnown RBP23.39■■□□□ 1.33
SRM-202ENST00000459997 SPPL3Q8TCT6 385 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 SLC7A3Q8WY07 619 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 DYDC2Q96IM9 177 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 FDXACB1Q9BRP7 624 aaPredicted RBP23.39■■□□□ 1.33
SRM-202ENST00000459997 AAASQ9NRG9 546 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 CLDND1Q9NY35 253 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 HCSTQ9UBK5 93 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 PCDHB12Q9Y5F1 795 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 PLXNA4Q9HCM2 1894 aa23.39■■□□□ 1.33
SRM-202ENST00000459997 H3BQ06 376 aaPredicted RBP23.38■■□□□ 1.33
SRM-202ENST00000459997 HOXA2O43364 376 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 POLGP54098 1239 aaPredicted RBP23.38■■□□□ 1.33
SRM-202ENST00000459997 GUCY1B3Q02153 619 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 CYP4A11Q02928 519 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 HYAL1Q12794 435 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 CTTNQ14247 550 aaKnown RBP23.38■■□□□ 1.33
SRM-202ENST00000459997 ZNF410Q86VK4 478 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 ECHDC2Q86YB7 292 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 KSR1Q8IVT5 923 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 C4orf19Q8IY42 314 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 RNF169Q8NCN4 708 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.38■■□□□ 1.33
SRM-202ENST00000459997 NEK9Q8TD19 979 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 NLRP4Q96MN2 994 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 TYW1Q9NV66 732 aaKnown RBP23.38■■□□□ 1.33
SRM-202ENST00000459997 PCDHA12Q9UN75 941 aa23.38■■□□□ 1.33
SRM-202ENST00000459997 WNT7AO00755 349 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 NCK2O43639 380 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 NEMFO60524 1076 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 SFPQP23246 707 aaKnown RBP eCLIP23.37■■□□□ 1.33
SRM-202ENST00000459997 YWHABP31946 246 aaKnown RBP23.37■■□□□ 1.33
SRM-202ENST00000459997 SAFBQ15424 915 aaKnown RBP eCLIP23.37■■□□□ 1.33
SRM-202ENST00000459997 PTCRAQ6ISU1 281 aaPredicted RBP23.37■■□□□ 1.33
SRM-202ENST00000459997 EXOC8Q8IYI6 725 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 ABI1Q8IZP0 508 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 POF1BQ8WVV4 589 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 LLPHQ9BRT6 129 aaKnown RBP23.37■■□□□ 1.33
SRM-202ENST00000459997 TMEM117Q9H0C3 514 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 ZSWIM4Q9H7M6 989 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 DACT1Q9NYF0 836 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 PPME1Q9Y570 386 aa23.37■■□□□ 1.33
SRM-202ENST00000459997 ARID2Q68CP9 1835 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms