RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CARD9Q9H257 536 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 CNOT10Q9H9A5 744 aaKnown RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 ACTR5Q9H9F9 607 aaPredicted RBP6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 SIX2Q9NPC8 291 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 GPRC5DQ9NZD1 345 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PGAP2Q9UHJ9 254 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM153AQ9UHL3 310 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 SERPINA10Q9UK55 444 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 AMFRQ9UKV5 643 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PLAAQ9Y263 795 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PCDHA1Q9Y5I3 950 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 PFASO15067 1338 aa6.67□□□□□ -1.34
UBQLN4-202ENST00000459954 DICER1Q9UPY3 1922 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 GMNCA6NCL1 334 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 UNCXA6NJT0 531 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 MIF4GDA9UHW6 222 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 KCNK3O14649 394 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 MAPK13O15264 365 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 PPFIA2O75334 1257 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 FTCDO95954 541 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 KRT14P02533 472 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 MAPTP10636 758 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC9A1P19634 815 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ECHS1P30084 290 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 HOXD13P35453 343 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SOX5P35711 763 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 HSD17B3P37058 310 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 FNTAP49354 379 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF131P52739 623 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SNRPFP62306 86 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ATP2B2Q01814 1243 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 POU5F1Q01860 360 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 PPATQ06203 517 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ALCAMQ13740 583 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 DHX34Q14147 1143 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 NAA35Q5VZE5 725 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TATDN1Q6P1N9 297 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TMEM179Q6ZVK1 233 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 PEX26Q7Z412 305 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 NLRP14Q86W24 1093 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 NELFCDQ8IXH7 590 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 RHOT2Q8IXI1 618 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 LRRC47Q8N1G4 583 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 OTUD6BQ8N6M0 293 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 METTL13Q8N6R0 699 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SMC1BQ8NDV3 1235 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 MYCBPAPQ8TBZ2 947 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 NEK9Q8TD19 979 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF473Q8WTR7 871 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 IFT81Q8WYA0 676 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 RFFLQ8WZ73 363 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TEKT1Q969V4 418 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC35C1Q96A29 364 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 LENG9Q96B70 501 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 HOOK2Q96ED9 719 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ZDHHC15Q96MV8 337 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 CCT8L2Q96SF2 557 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 GMLQ99445 158 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SYT11Q9BT88 431 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TMEM109Q9BVC6 243 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 TXLNGYQ9BZA5 131 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 DDX4Q9NQI0 724 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 USP40Q9NVE5 1235 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 DMAC2Q9NW81 257 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC12A6Q9UHW9 1150 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 CNOT7Q9UIV1 285 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ODF2LQ9ULJ1 636 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 UTP11Q9Y3A2 253 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 RABGAP1Q9Y3P9 1069 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 FRMPD4Q14CM0 1322 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SBF1O95248 1867 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 MYH9P35579 1960 aaKnown RBP6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 SCN9AQ15858 1988 aa6.66□□□□□ -1.34
UBQLN4-202ENST00000459954 ARID2Q68CP9 1835 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 GOLGA6L10A0A0M3HER8 536 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 ANKRD62A6NC57 917 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 SPDYE3A6NKU9 549 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 YDJCA8MPS7 323 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 KRIT1O00522 736 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 DDX3XO00571 662 aaKnown RBP eCLIP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PODXLO00592 558 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 RIMBP2O15034 1052 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 TRAPPC3O43617 180 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 CEP104O60308 925 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PLA2G6O60733 806 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 TBCAO75347 108 aaKnown RBP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 AKAP3O75969 853 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 MTA2O94776 668 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 DDNO94850 711 aaPredicted RBP6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 NUDT17P0C025 328 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 GHRP10912 638 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 EPHX2P34913 555 aa6.65□□□□□ -1.34
UBQLN4-202ENST00000459954 PRELPP51888 382 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms