RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PIGOQ8TEQ8 1089 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 NLRP7Q8WX94 980 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 PPM1EQ8WY54 764 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 MTRQ99707 1265 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 DHX33Q9H6R0 707 aaKnown RBP24.24■■□□□ 1.47
SSNA1-202ENST00000459860 SLC28A3Q9HAS3 691 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 BMP2KQ9NSY1 1161 aaPredicted RBP24.24■■□□□ 1.47
SSNA1-202ENST00000459860 SUCLA2Q9P2R7 463 aaPredicted RBP24.24■■□□□ 1.47
SSNA1-202ENST00000459860 ZBTB39O15060 712 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 RPS6KA5O75582 802 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 DGAT1O75907 488 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 MYOGP15173 224 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 RARRES1P49788 294 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 GPC3P51654 580 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 TCTN1Q2MV58 587 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 ZNF579Q8NAF0 562 aaKnown RBP24.23■■□□□ 1.47
SSNA1-202ENST00000459860 PSPC1Q8WXF1 523 aaKnown RBP24.23■■□□□ 1.47
SSNA1-202ENST00000459860 FTHL17Q9BXU8 183 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 OSBPL7Q9BZF2 842 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 ATP6V0A4Q9HBG4 840 aa24.23■■□□□ 1.47
SSNA1-202ENST00000459860 DBR1Q9UK59 544 aaKnown RBP24.23■■□□□ 1.47
SSNA1-202ENST00000459860 GPR32O75388 356 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 ZSCAN22P10073 491 aaPredicted RBP24.22■■□□□ 1.47
SSNA1-202ENST00000459860 DRP2Q13474 957 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 IL17AQ16552 155 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 FAM173BQ6P4H8 233 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 FAM43BQ6ZT52 329 aaPredicted RBP24.22■■□□□ 1.47
SSNA1-202ENST00000459860 RHPN2Q8IUC4 686 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 AK8Q96MA6 479 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 AGO3Q9H9G7 860 aaKnown RBP24.22■■□□□ 1.47
SSNA1-202ENST00000459860 PADI3Q9ULW8 664 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 PCDHA11Q9Y5I1 949 aa24.22■■□□□ 1.47
SSNA1-202ENST00000459860 ARHGEF35A5YM69 484 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 PP2D1A8MPX8 630 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 GPR182O15218 404 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 NFX1Q12986 1120 aaKnown RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 MKRN4PQ13434 485 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 ZNF410Q86VK4 478 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 HERC6Q8IVU3 1022 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 MYOCDQ8IZQ8 938 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 ATXN2LQ8WWM7 1075 aaKnown RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 CDK5RAP3Q96JB5 506 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 ZNF396Q96N95 335 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 ZBED2Q9BTP6 218 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 GCOM2Q9BZD3 368 aaPredicted RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 CDHR5Q9HBB8 845 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 DDX19AQ9NUU7 478 aaKnown RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 KIAA1024Q9UPX6 916 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 NOC2LQ9Y3T9 749 aaKnown RBP24.21■■□□□ 1.47
SSNA1-202ENST00000459860 COL4A3BPQ9Y5P4 624 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 CLIC4Q9Y696 253 aa24.21■■□□□ 1.47
SSNA1-202ENST00000459860 USO1O60763 962 aaKnown RBP24.2■■□□□ 1.46
SSNA1-202ENST00000459860 DEFB103AP81534 67 aa24.2■■□□□ 1.46
SSNA1-202ENST00000459860 CEBPZQ03701 1054 aaKnown RBP24.2■■□□□ 1.46
SSNA1-202ENST00000459860 ZRSR1Q15695 479 aaKnown RBP24.2■■□□□ 1.46
SSNA1-202ENST00000459860 FOXD4L5Q5VV16 416 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-202ENST00000459860 FOXD4L4Q8WXT5 416 aaPredicted RBP24.2■■□□□ 1.46
SSNA1-202ENST00000459860 TMEM143Q96AN5 459 aa24.2■■□□□ 1.46
SSNA1-202ENST00000459860 NLRP4Q96MN2 994 aa24.2■■□□□ 1.46
SSNA1-202ENST00000459860 ADAMTS10Q9H324 1103 aa24.2■■□□□ 1.46
SSNA1-202ENST00000459860 ASAP2O43150 1006 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 F13A1P00488 732 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 IGFBP4P22692 258 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 EIF4BP23588 611 aaKnown RBP24.19■■□□□ 1.46
SSNA1-202ENST00000459860 LONP1P36776 959 aaKnown RBP24.19■■□□□ 1.46
SSNA1-202ENST00000459860 CCDC85BQ15834 202 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-202ENST00000459860 MCPH1Q8NEM0 835 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 TMEM40Q8WWA1 233 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 ZNF668Q96K58 619 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-202ENST00000459860 INO80BQ9C086 356 aaPredicted RBP24.19■■□□□ 1.46
SSNA1-202ENST00000459860 NT5C3AQ9H0P0 336 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 DNM3Q9UQ16 869 aa24.19■■□□□ 1.46
SSNA1-202ENST00000459860 A0A087WWV3 80 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 DARSP14868 501 aaKnown RBP24.18■■□□□ 1.46
SSNA1-202ENST00000459860 CDC25AP30304 524 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 UBA7P41226 1012 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 MXD4Q14582 209 aaPredicted RBP24.18■■□□□ 1.46
SSNA1-202ENST00000459860 PPP2R2DQ66LE6 453 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.18■■□□□ 1.46
SSNA1-202ENST00000459860 ASB2Q96Q27 587 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 USP28Q96RU2 1077 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 ERVK-5Q9HDB9 667 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 THEGQ9P2T0 379 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 ST3GAL5Q9UNP4 418 aa24.18■■□□□ 1.46
SSNA1-202ENST00000459860 A0A087WZ62 844 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 DENND3A2RUS2 1198 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 SLC26A4O43511 780 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 TLL1O43897 1013 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 SFPQP23246 707 aaKnown RBP eCLIP24.17■■□□□ 1.46
SSNA1-202ENST00000459860 TFDP1Q14186 410 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 STK38Q15208 465 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 PTPAQ15257 358 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 ECM1Q16610 540 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 CABP7Q86V35 215 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 FAM228AQ86W67 206 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 KCTD17Q8N5Z5 321 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 RASSF8Q8NHQ8 419 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 PRPF31Q8WWY3 499 aaKnown RBP24.17■■□□□ 1.46
SSNA1-202ENST00000459860 CALML4Q96GE6 196 aa24.17■■□□□ 1.46
SSNA1-202ENST00000459860 FDXACB1Q9BRP7 624 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms