RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 BSPRYQ5W0U4 402 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 I3L4J1 428 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 IFNB1P01574 187 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 CCNE1P24864 410 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 USP11P51784 963 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 C4orf50Q6ZRC1 276 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 USP6NLQ92738 828 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 GOLPH3LQ9H4A5 285 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 FAM8A1Q9UBU6 413 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 SYNJ2BP-COX16A0A087WUM0 186 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 RGS2P41220 211 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 VPS41P49754 854 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 AP3M2P53677 418 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 DYNC1I2Q13409 638 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 DNAJC24Q6P3W2 148 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 BHMT2Q9H2M3 363 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 COX16Q9P0S2 106 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 QRICH1Q2TAL8 776 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 IER5Q5VY09 327 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 MRPL4Q9BYD3 311 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 EHD2Q9NZN4 543 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 SCINQ9Y6U3 715 aa11.53□□□□□ -0.56
AMBRA1-202ENST00000458649 MEIS1O00470 390 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 KIAA0391O15091 583 aaKnown RBP11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 MAGEB2O15479 319 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 EPHX2P34913 555 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 PEX3P56589 373 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 C12orf60Q5U649 245 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 SARM1Q6SZW1 724 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 OR6B3Q8NGW1 331 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 CXorf38Q8TB03 319 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 SEPT10Q9P0V9 454 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 SLC9A2Q9UBY0 812 aa11.52□□□□□ -0.56
AMBRA1-202ENST00000458649 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 CTTNQ14247 550 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 PSMD6Q15008 389 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 SBK1Q52WX2 424 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 VSTM4Q8IW00 320 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 SMARCAD1Q9H4L7 1026 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 H7C0C1 242 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 ATP5OP48047 213 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 KRT12Q99456 494 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 STRIP2Q9ULQ0 834 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 C6orf222P0C671 652 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 ATP1A3P13637 1013 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 OSTNP61366 133 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 LRRC41Q15345 812 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-202ENST00000458649 RBL2Q08999 1139 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 THNSL1Q8IYQ7 743 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 PDE11AQ9HCR9 933 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 CPT1AP50416 773 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 ACTR5Q9H9F9 607 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 VPS37BQ9H9H4 285 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 EPHB1P54762 984 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 SATB1Q01826 763 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 ERO1BQ86YB8 467 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 PPP1R16BQ96T49 567 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 TAF6LQ9Y6J9 622 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 SALL3Q9BXA9 1300 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 IPO5O00410 1097 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 TAF11Q15544 211 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 AAASQ9NRG9 546 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 GABBR1Q9UBS5 961 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 PXDNQ92626 1479 aa11.51□□□□□ -0.57
AMBRA1-202ENST00000458649 MAFGO15525 162 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 APBA1Q02410 837 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
AMBRA1-202ENST00000458649 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms