RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 RSPH1Q8WYR4 309 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 PPP1R16BQ96T49 567 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 PHOX2BQ99453 314 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 ENTPD7Q9NQZ7 604 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 TCEAL9Q9UHQ7 104 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 DMDP11532 3685 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 A0A0U1RQF3 1178 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 WDR64B1ANS9 1081 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 ZNF862O60290 1169 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 ZSCAN20P17040 1043 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-227ENST00000458564 GNA11P29992 359 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
HDLBP-227ENST00000458564 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.522e-9■□□□□ 8.1
HDLBP-227ENST00000458564 NUBP1P53384 320 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 KRT17Q04695 432 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 PRR16Q569H4 304 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 CLLU1OSQ5K130 101 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 EFCAB12Q6NXP0 572 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
HDLBP-227ENST00000458564 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 CASP10Q92851 521 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 NECTIN4Q96NY8 510 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 GABBR1Q9UBS5 961 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
HDLBP-227ENST00000458564 MYH9P35579 1960 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 ADAMTS3O15072 1205 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 EOMESO95936 686 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 OATP04181 439 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 DARSP14868 501 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 GPC3P51654 580 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 VCPP55072 806 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 PRKCEQ02156 737 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 ITIH3Q06033 890 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 TMC7Q7Z402 723 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 MRPL43Q8N983 215 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 RIT2Q99578 217 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
HDLBP-227ENST00000458564 IRF2BPLQ9H1B7 796 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 HCFC2Q9Y5Z7 792 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
HDLBP-227ENST00000458564 CARNS1A5YM72 827 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 C2orf71A6NGG8 1288 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
HDLBP-227ENST00000458564 ST18O60284 1047 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 AVPR2P30518 371 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 SFNP31947 248 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 PBX3P40426 434 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 KCNB2Q92953 911 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 ADAM7Q9H2U9 754 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 DISC1Q9NRI5 854 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 IRAK3Q9Y616 596 aa11.78□□□□□ -0.52
HDLBP-227ENST00000458564 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.52
HDLBP-227ENST00000458564 MSH4O15457 936 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 EDIL3O43854 480 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 USP11P51784 963 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 JAK3P52333 1124 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-227ENST00000458564 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 MTMR3Q13615 1198 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 TARBP2Q15633 366 aaKnown RBP11.77□□□□□ -0.53
HDLBP-227ENST00000458564 UGCGQ16739 394 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 CES5AQ6NT32 575 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 TRMT1LQ7Z2T5 733 aaKnown RBP11.77□□□□□ -0.53
HDLBP-227ENST00000458564 KREMEN2Q8NCW0 462 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 RDM1Q8NG50 284 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 SLC5A5Q92911 643 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 RIPOR3Q96MK2 946 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 RNF26Q9BY78 433 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-227ENST00000458564 AGXT2Q9BYV1 514 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 CHST12Q9NRB3 414 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 SORCS3Q9UPU3 1222 aa11.77□□□□□ -0.53
HDLBP-227ENST00000458564 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 GAS7O60861 476 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 CLASP2O75122 1294 aaKnown RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 MTHFRP42898 656 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-227ENST00000458564 BCAR1P56945 870 aa11.76□□□□□ -0.53
HDLBP-227ENST00000458564 FGD1P98174 961 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms