RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-222	ENST00000457264	RNF169	Q8NCN4	708 aa		18.91	■□□□□ 0.62
MRPL55-222	ENST00000457264	ADAMTS10	Q9H324	1103 aa		18.91	■□□□□ 0.62
MRPL55-222	ENST00000457264	HIDE1	A8MVS5	230 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	PTPN21	Q16825	1174 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	BMP2KL	Q5H9B9	411 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	SYCE2	Q6PIF2	218 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	ECHDC2	Q86YB7	292 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	LRRC71	Q8N4P6	559 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	SCLT1	Q96NL6	688 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	PHOX2B	Q99453	314 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	ATG2A	Q2TAZ0	1938 aa		18.9	■□□□□ 0.62
MRPL55-222	ENST00000457264	TECTA	O75443	2155 aa		18.89	■□□□□ 0.62
MRPL55-222	ENST00000457264	WDR64	B1ANS9	1081 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	CIITA	P33076	1130 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	PBX3	P40426	434 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	AKAP17A	Q02040	695 aa	Known RBP	18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	TPRN	Q4KMQ1	711 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	BICD2	Q8TD16	824 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	CASP10	Q92851	521 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	ASIC4	Q96FT7	647 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	DISC1	Q9NRI5	854 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	RNF19A	Q9NV58	838 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	NR2E1	Q9Y466	385 aa		18.89	■□□□□ 0.61
MRPL55-222	ENST00000457264	ADAMTS3	O15072	1205 aa		18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	EOMES	O95936	686 aa		18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	OAT	P04181	439 aa		18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	SP100	P23497	879 aa	Predicted RBP	18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	SMC1A	Q14683	1233 aa	Known RBP	18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	BMS1	Q14692	1282 aa	Known RBP	18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	CES5A	Q6NT32	575 aa		18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	MRPL43	Q8N983	215 aa	Known RBP	18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	ZNF668	Q96K58	619 aa	Predicted RBP	18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264	TSHZ2	Q9NRE2	1034 aa		18.88	■□□□□ 0.61
MRPL55-222	ENST00000457264		A0A0U1RQF3	1178 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	PRPF3	O43395	683 aa	Known RBP	18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	DARS	P14868	501 aa	Known RBP	18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	AVPR2	P30518	371 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	ALDH7A1	P49419	539 aa	Known RBP	18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	TCF15	Q12870	199 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	LINC01465	Q8N7H1	131 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	NLRP7	Q8WX94	980 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	IRF2BPL	Q9H1B7	796 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	DACT1	Q9NYF0	836 aa		18.87	■□□□□ 0.61
MRPL55-222	ENST00000457264	ZNF318	Q5VUA4	2279 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	ZNF862	O60290	1169 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	GAS7	O60861	476 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	CA8	P35219	290 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	GPC3	P51654	580 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	PRKCE	Q02156	737 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	ITIH3	Q06033	890 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	TBC1D8B	Q0IIM8	1120 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	CLLU1OS	Q5K130	101 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264		Q6ZUG5	572 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	SLC39A11	Q8N1S5	342 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	TMEM87A	Q8NBN3	555 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	BRF1	Q92994	677 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	CCDC136	Q96JN2	1154 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	NECTIN4	Q96NY8	510 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	RIT2	Q99578	217 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	MRPL9	Q9BYD2	267 aa	Known RBP	18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	ADAM7	Q9H2U9	754 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	HCFC2	Q9Y5Z7	792 aa		18.86	■□□□□ 0.61
MRPL55-222	ENST00000457264	C2orf71	A6NGG8	1288 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	CHMP2A	O43633	222 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	ST18	O60284	1047 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	CXCL14	O95715	111 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	CPA1	P15085	419 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	SFN	P31947	248 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	VCP	P55072	806 aa	Known RBP	18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	CDC42EP1	Q00587	391 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	KREMEN2	Q8NCW0	462 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	CCDC148	Q8NFR7	591 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	HELQ	Q8TDG4	1101 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	PHKB	Q93100	1093 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	LENG9	Q96B70	501 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	KIAA1671	Q9BY89	1806 aa		18.85	■□□□□ 0.61
MRPL55-222	ENST00000457264	MSH4	O15457	936 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	FGFR4	P22455	802 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	USP11	P51784	963 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	JAK3	P52333	1124 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	LRCH2	Q5VUJ6	765 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	ZNF598	Q86UK7	904 aa	Known RBP	18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	UBALD2	Q8IYN6	164 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	TMEM169	Q96HH4	297 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	RIPOR3	Q96MK2	946 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	TEKT3	Q9BXF9	490 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	PLXNA4	Q9HCM2	1894 aa		18.84	■□□□□ 0.61
MRPL55-222	ENST00000457264	NT5C1B-RDH14	C9J2C7	533 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	CLASP2	O75122	1294 aa	Known RBP	18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	CDC45	O75419	566 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	CSDE1	O75534	798 aa	Known RBP	18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	MTHFR	P42898	656 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	DNM2	P50570	870 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	BCAR1	P56945	870 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	MTMR3	Q13615	1198 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	UGCG	Q16739	394 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	BLOC1S2	Q6QNY1	142 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	RSPH1	Q8WYR4	309 aa		18.83	■□□□□ 0.6
MRPL55-222	ENST00000457264	ATOH1	Q92858	354 aa	Predicted RBP	18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms