RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 CSRNP2Q9H175 543 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 SUGCTQ9HAC7 445 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 IL23AQ9NPF7 189 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 DBR1Q9UK59 544 aaKnown RBP11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 SLC26A4O43511 780 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 PPP6R2O75170 966 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 GPR32O75388 356 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CTSHP09668 335 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 ACRP10323 421 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 TMOD1P28289 359 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CLCN3P51790 818 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 TMEM62Q0P6H9 643 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 GRB10Q13322 594 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 SPECC1Q5M775 1068 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 TMEM240Q5SV17 173 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 IER5Q5VY09 327 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 KCNK18Q7Z418 384 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 EXOC8Q8IYI6 725 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 EPSTI1Q96J88 318 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CELF4Q9BZC1 486 aaKnown RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CCSER1Q9C0I3 900 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 XPNPEP1Q9NQW7 623 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 DDX19AQ9NUU7 478 aaKnown RBP11.21□□□□□ -0.61
ATG4A-206ENST00000457035 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 CDY2AQ9Y6F7 541 aa11.21□□□□□ -0.61
ATG4A-206ENST00000457035 TTC3P53804 2025 aa11.21□□□□□ -0.62
ATG4A-206ENST00000457035 MICAL3Q7RTP6 2002 aa11.21□□□□□ -0.62
ATG4A-206ENST00000457035 E9PMD0 336 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 DGAT1O75907 488 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 EYA4O95677 639 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 VTNP04004 478 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 RFC5P40937 340 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 UBA7P41226 1012 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 SHHQ15465 462 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 TMEM119Q4V9L6 283 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 AXDND1Q5T1B0 1012 aaPredicted RBP11.2□□□□□ -0.62
ATG4A-206ENST00000457035 CABP7Q86V35 215 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 LRRC15Q8TF66 581 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 SLC7A3Q8WY07 619 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 JPH2Q9BR39 696 aaPredicted RBP11.2□□□□□ -0.62
ATG4A-206ENST00000457035 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATG4A-206ENST00000457035 ADAMTS10Q9H324 1103 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 PCDHA7Q9UN72 937 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 DNM3Q9UQ16 869 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 STXBP5LQ9Y2K9 1186 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
ATG4A-206ENST00000457035 FGBP02675 491 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 PFKMP08237 780 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 DNM2P50570 870 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 POLGP54098 1239 aaPredicted RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 LPIN1Q14693 890 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 EMC2Q15006 297 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 FBXO47Q5MNV8 452 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 TMEM143Q96AN5 459 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 PLIN2Q99541 437 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 NT5C3AQ9H0P0 336 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 BHMT2Q9H2M3 363 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 AGO3Q9H9G7 860 aaKnown RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 SUCLA2Q9P2R7 463 aaPredicted RBP11.19□□□□□ -0.62
ATG4A-206ENST00000457035 AKT3Q9Y243 479 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 TRPV2Q9Y5S1 764 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
ATG4A-206ENST00000457035 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 ASAP2O43150 1006 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 GAS2O43903 313 aaKnown RBP11.18□□□□□ -0.62
ATG4A-206ENST00000457035 CUTAO60888 179 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 CYP11B2P19099 503 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 ARL2P36404 184 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 GPC3P51654 580 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 CRYBB1P53674 252 aaPredicted RBP11.18□□□□□ -0.62
ATG4A-206ENST00000457035 KRT85P78386 507 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 CDC42EP1Q00587 391 aa11.18□□□□□ -0.62
ATG4A-206ENST00000457035 KARSQ15046 597 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms