RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 MUTP22033 750 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 IGFBP4P22692 258 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 TOB1P50616 345 aaPredicted RBP25.85■■□□□ 1.73
CBX3-204ENST00000456948 FXR2P51116 673 aaKnown RBP eCLIP25.85■■□□□ 1.734e-11■□□□□ 8.2
CBX3-204ENST00000456948 DTHD1Q6ZMT9 781 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 BRAPQ7Z569 592 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 NPAS4Q8IUM7 802 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.85■■□□□ 1.73
CBX3-204ENST00000456948 TMEM40Q8WWA1 233 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 MTRQ99707 1265 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 LRWD1Q9UFC0 647 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 PCDHB7Q9Y5E2 793 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 PCDHB6Q9Y5E3 794 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 SIP14410 1827 aa25.85■■□□□ 1.73
CBX3-204ENST00000456948 RBAK-RBAKDNI3L0D1 243 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 DGAT1O75907 488 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 DARSP14868 501 aaKnown RBP25.84■■□□□ 1.73
CBX3-204ENST00000456948 SFPQP23246 707 aaKnown RBP eCLIP25.84■■□□□ 1.73
CBX3-204ENST00000456948 RPA1P27694 616 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 PRPHP41219 470 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 SLC24A5Q71RS6 500 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 FAM228AQ86W67 206 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 ADAM2Q99965 735 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 EYSQ5T1H1 3165 aa25.84■■□□□ 1.73
CBX3-204ENST00000456948 TTC3P53804 2025 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 PTPRSQ13332 1948 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 LCHNA4D1U4 455 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 SARSP49591 514 aaKnown RBP25.83■■□□□ 1.73
CBX3-204ENST00000456948 MXD4Q14582 209 aaPredicted RBP25.83■■□□□ 1.73
CBX3-204ENST00000456948 EMC2Q15006 297 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 CATSPER3Q86XQ3 398 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 HSCBQ8IWL3 235 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 FIBCD1Q8N539 461 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 SP7Q8TDD2 431 aaPredicted RBP25.83■■□□□ 1.73
CBX3-204ENST00000456948 PPM1EQ8WY54 764 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 TMX1Q9H3N1 280 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 CERS4Q9HA82 394 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 RGS18Q9NS28 235 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 DACT1Q9NYF0 836 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 RWDD3Q9Y3V2 267 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 COL4A3BPQ9Y5P4 624 aa25.83■■□□□ 1.73
CBX3-204ENST00000456948 LINC01553A4QN01 128 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 VPS37CA5D8V6 355 aaPredicted RBP25.82■■□□□ 1.72
CBX3-204ENST00000456948 DLL1O00548 723 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 ERVK-21P61565 698 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 DRP2Q13474 957 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 NBR1Q14596 966 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 RTN4RL1Q86UN2 441 aaPredicted RBP25.82■■□□□ 1.72
CBX3-204ENST00000456948 C4orf32Q8N8J7 132 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 SNX21Q969T3 373 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 NLRP4Q96MN2 994 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 ATP6V0A4Q9HBG4 840 aa25.82■■□□□ 1.72
CBX3-204ENST00000456948 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.82■■□□□ 1.72
CBX3-204ENST00000456948 A0A087WZ62 844 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 BMP15O95972 392 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 HSP90AA1P07900 732 aaKnown RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 TFDP1Q14186 410 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 BTG3Q14201 252 aaPredicted RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 KRT79Q5XKE5 535 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 PRPF31Q8WWY3 499 aaKnown RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 TMEM143Q96AN5 459 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 ZNF668Q96K58 619 aaPredicted RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 FDXACB1Q9BRP7 624 aaPredicted RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 CHST12Q9NRB3 414 aa25.81■■□□□ 1.72
CBX3-204ENST00000456948 DBR1Q9UK59 544 aaKnown RBP25.81■■□□□ 1.72
CBX3-204ENST00000456948 ZBTB39O15060 712 aa25.8■■□□□ 1.72
CBX3-204ENST00000456948 SPATA31C1P0DKV0 1188 aa25.8■■□□□ 1.72
CBX3-204ENST00000456948 CCT6AP40227 531 aaKnown RBP25.8■■□□□ 1.72
CBX3-204ENST00000456948 RARRES1P49788 294 aa25.8■■□□□ 1.72
CBX3-204ENST00000456948 ZNF579Q8NAF0 562 aaKnown RBP25.8■■□□□ 1.72
CBX3-204ENST00000456948 PIGOQ8TEQ8 1089 aa25.8■■□□□ 1.72
CBX3-204ENST00000456948 CHD9Q3L8U1 2897 aa25.8■■□□□ 1.72
CBX3-204ENST00000456948 DGKIO75912 1065 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 SRGAP2CP0DJJ0 459 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 IBSPP21815 317 aaPredicted RBP25.79■■□□□ 1.72
CBX3-204ENST00000456948 NCBP1Q09161 790 aaKnown RBP25.79■■□□□ 1.72
CBX3-204ENST00000456948 SRGAP1Q7Z6B7 1085 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 MCPH1Q8NEM0 835 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 LINC01599Q8WXQ3 324 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 ELAC1Q9H777 363 aaKnown RBP25.79■■□□□ 1.72
CBX3-204ENST00000456948 MTUS1Q9ULD2 1270 aa25.79■■□□□ 1.72
CBX3-204ENST00000456948 A0A0C4DFX4 3053 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 HOXA2O43364 376 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 MED24O75448 989 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 PDIA4P13667 645 aaKnown RBP25.78■■□□□ 1.72
CBX3-204ENST00000456948 PHKA2P46019 1235 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 LAMTOR4Q0VGL1 99 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 ADGRE1Q14246 886 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 PCBP1Q15365 356 aaKnown RBP eCLIP25.78■■□□□ 1.72
CBX3-204ENST00000456948 ARL6IP4Q66PJ3 421 aaKnown RBP25.78■■□□□ 1.72
CBX3-204ENST00000456948 CATSPER4Q7RTX7 472 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 FERMT3Q86UX7 667 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 CMTR2Q8IYT2 770 aaKnown RBP25.78■■□□□ 1.72
CBX3-204ENST00000456948 IGSF22Q8N9C0 903 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 FBXO22Q8NEZ5 403 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 BMP2KQ9NSY1 1161 aaPredicted RBP25.78■■□□□ 1.72
CBX3-204ENST00000456948 ADGRA3Q8IWK6 1321 aa25.78■■□□□ 1.72
CBX3-204ENST00000456948 ARHGEF35A5YM69 484 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 SKIP12755 728 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 POU3F3P20264 500 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms