RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 STK32AQ8WU08 396 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SAYSD1Q9NPB0 183 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PKD2L2Q9NZM6 624 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TBC1D7Q9P0N9 293 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 GCNT4Q9P109 453 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 CHMP2BQ9UQN3 213 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 GDAQ9Y2T3 454 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ADGRA3Q8IWK6 1321 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 IQSEC2Q5JU85 1478 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF185O15231 689 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 RAD51CO43502 376 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 NCK2O43639 380 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF189O75820 626 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ADD2P35612 726 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ARL1P40616 181 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SKIV2L2P42285 1042 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TRPC1P48995 793 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 GFPT1Q06210 699 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 DPYDQ12882 1025 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 NR5A1Q13285 461 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 DCTN2Q13561 401 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TRMT5Q32P41 509 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 CWF19L1Q69YN2 538 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 CCDC137Q6PK04 289 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ACAD11Q709F0 780 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 FRA10AC1Q70Z53 315 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 MB21D2Q8IYB1 491 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ATP6V0A1Q93050 837 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 MMADHCQ9H3L0 296 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TRABDQ9H4I3 376 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TMEM120BA0PK00 339 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 AP1G2O75843 785 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 STAM2O75886 525 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PLCG1P19174 1290 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PSMC1P62191 440 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 FMR1Q06787 632 aaKnown RBP eCLIP5.34□□□□□ -1.557e-10■■■■■ 35
PCDH9-203ENST00000456367 LBRQ14739 615 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 WDR60Q8WVS4 1066 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 TRIM63Q969Q1 353 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 NR1H4Q96RI1 486 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SAR1AQ9NR31 198 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 AMACRQ9UHK6 382 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SLC4A7Q9Y6M7 1214 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PNPLA6Q8IY17 1366 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 TOM1L1O75674 476 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 SERPINI2O75830 405 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 SASH1O94885 1247 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 PRR29P0C7W0 189 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 NCF2P19878 526 aaPredicted RBP5.34□□□□□ -1.56
PCDH9-203ENST00000456367 ATP2C1P98194 919 aaPredicted RBP5.34□□□□□ -1.56
PCDH9-203ENST00000456367 SLC34A1Q06495 639 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 XRCC4Q13426 336 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 RASGRF1Q13972 1273 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 LACTB2Q53H82 288 aaPredicted RBP5.34□□□□□ -1.56
PCDH9-203ENST00000456367 SYCP2LQ5T4T6 812 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 FOXR1Q6PIV2 292 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 PASD1Q8IV76 773 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 GIPC2Q8TF65 315 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 PGM2Q96G03 612 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 CEP19Q96LK0 163 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 CCSER1Q9C0I3 900 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 TMEM206Q9H813 350 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 BLOC1S6Q9UL45 172 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 PCDH11YQ9BZA8 1340 aa5.34□□□□□ -1.56
PCDH9-203ENST00000456367 RSPH10B2B2RC85 870 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 DNAJC6O75061 913 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 SPAG6O75602 509 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 CCDC159P0C7I6 412 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 RSPH10BP0C881 870 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 SERPINB1P30740 379 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 DEFA1P59665 94 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 DEFA3P59666 94 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 MRPS15P82914 257 aaKnown RBP5.33□□□□□ -1.56
PCDH9-203ENST00000456367 SLC39A6Q13433 755 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 NCAPHQ15003 741 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 RCN1Q15293 331 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 JADE1Q6IE81 842 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC8BQ6P9F7 803 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 CDAN1Q8IWY9 1227 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 PNMA1Q8ND90 353 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 IL17REQ8NFR9 667 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 ATL2Q8NHH9 583 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 ZCRB1Q8TBF4 217 aaKnown RBP5.33□□□□□ -1.56
PCDH9-203ENST00000456367 ACTRT1Q8TDG2 376 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 TATDN2Q93075 761 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 PBXIP1Q96AQ6 731 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 MTRQ99707 1265 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 RNPEPL1Q9HAU8 725 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 HACD3Q9P035 362 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 CIDEBQ9UHD4 219 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 PLAGL2Q9UPG8 496 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 HPSEQ9Y251 543 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 C2CD2Q9Y426 696 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 PALLDQ8WX93 1383 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF839A8K0R7 811 aa5.33□□□□□ -1.56
PCDH9-203ENST00000456367 CAPN9O14815 690 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms