RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 COLEC12Q5KU26 742 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 FKBP15Q5T1M5 1219 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 FSTL4Q6MZW2 842 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 KCNV1Q6PIU1 500 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 LRRC55Q6ZSA7 311 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 HTR3DQ70Z44 454 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 ANKRD53Q8N9V6 530 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 PTPRN2Q92932 1015 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 PGBD4Q96DM1 585 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 MNTQ99583 582 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 TCF25Q9BQ70 676 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 TOR3AQ9H497 397 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 IL23AQ9NPF7 189 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 KCNH7Q9NS40 1196 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 RBM8AQ9Y5S9 174 aaKnown RBP3.61□□□□□ -1.83
LINC02540-201ENST00000455554 C2orf78A6NCI8 922 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 KRTAP29-1A8MX34 341 aaPredicted RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 SCDO00767 359 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 B3GALT2O43825 422 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 FGRP09769 529 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 ZNF37AP17032 561 aaPredicted RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 DNM2P50570 870 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 ADAM8P78325 824 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 LACTBP83111 547 aaPredicted RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 TCIRG1Q13488 830 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 GNL2Q13823 731 aaKnown RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 HECTD2Q5U5R9 776 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 MFSD5Q6N075 450 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 OLFML1Q6UWY5 402 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 NOSTRINQ8IVI9 506 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 ELOA2Q8IYF1 753 aaPredicted RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 ATXN2LQ8WWM7 1075 aaKnown RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 PRDM13Q9H4Q3 707 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 SAE1Q9UBE0 346 aaPredicted RBP3.6□□□□□ -1.83
LINC02540-201ENST00000455554 HS3ST4Q9Y661 456 aa3.6□□□□□ -1.83
LINC02540-201ENST00000455554 RASSF10A6NK89 507 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 GRXCR1A8MXD5 290 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 GOLGA6L22H0YM25 854 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 INO80B-WBP1J3KQ70 363 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 MFAP3LO75121 409 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 IPO13O94829 963 aaKnown RBP3.59□□□□□ -1.83
LINC02540-201ENST00000455554 ERBB2P04626 1255 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 CDK4P11802 303 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 GAGE13Q4V321 117 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 C1QL3Q5VWW1 255 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 ZC3H7AQ8IWR0 971 aaKnown RBP3.59□□□□□ -1.83
LINC02540-201ENST00000455554 MB21D1Q8N884 522 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 INO80BQ9C086 356 aaPredicted RBP3.59□□□□□ -1.83
LINC02540-201ENST00000455554 SYNPO2LQ9H987 977 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 RCAN3Q9UKA8 241 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 DENND2AQ9ULE3 1009 aa3.59□□□□□ -1.83
LINC02540-201ENST00000455554 ZBTB7CA1YPR0 619 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 KIAA0355O15063 1070 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 ZFP36P26651 326 aaKnown RBP3.58□□□□□ -1.84
LINC02540-201ENST00000455554 SDHAP31040 664 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 SUMO1P63165 101 aaKnown RBP3.58□□□□□ -1.84
LINC02540-201ENST00000455554 PLEKHG4Q58EX7 1191 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 NAIF1Q69YI7 327 aaPredicted RBP3.58□□□□□ -1.84
LINC02540-201ENST00000455554 ANKS3Q6ZW76 656 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 CISD2Q8N5K1 135 aaKnown RBP3.58□□□□□ -1.84
LINC02540-201ENST00000455554 BEND2Q8NDZ0 799 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 MDGA1Q8NFP4 955 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 CYP4F11Q9HBI6 524 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 MAGEL2Q9UJ55 1249 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 PCDHA9Q9Y5H5 950 aa3.58□□□□□ -1.84
LINC02540-201ENST00000455554 C6orf222P0C671 652 aaPredicted RBP3.57□□□□□ -1.84
LINC02540-201ENST00000455554 VSIG10L2P0DP72 767 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 GABREP78334 506 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ALDH6A1Q02252 535 aaKnown RBP3.57□□□□□ -1.84
LINC02540-201ENST00000455554 TAP1Q03518 808 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ARID5AQ03989 594 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 TMEM132BQ14DG7 1078 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 TIGD2Q4W5G0 525 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 NBPF6Q5VWK0 638 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 KRT40Q6A162 431 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 BHLHA9Q7RTU4 235 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 RD3Q7Z3Z2 195 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 LRP10Q7Z4F1 713 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 OR5AN1Q8NGI8 311 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 CPT1CQ8TCG5 803 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ERCC4Q92889 916 aaPredicted RBP3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ARL8AQ96BM9 186 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ZNF669Q96BR6 464 aaPredicted RBP3.57□□□□□ -1.84
LINC02540-201ENST00000455554 NBPF4Q96M43 638 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 ZNF512Q96ME7 567 aaPredicted RBP3.57□□□□□ -1.84
LINC02540-201ENST00000455554 CDC6Q99741 560 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 FOXB1Q99853 325 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 SPATA9Q9BWV2 254 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 SORCS3Q9UPU3 1222 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 B3GALT1Q9Y5Z6 326 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 COX11Q9Y6N1 276 aa3.57□□□□□ -1.84
LINC02540-201ENST00000455554 COL4A3Q01955 1670 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 TRBV23-1A0A0A0MS06 115 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 KLF4O43474 513 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 RECQL4O94761 1208 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 TOX4O94842 621 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 CRTAMO95727 393 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 ITGB6P18564 788 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 GNAT2P19087 354 aa3.56□□□□□ -1.84
LINC02540-201ENST00000455554 CLK3P49761 638 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms