RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 ARHGEF35A5YM69 484 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 PPP6R2O75170 966 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 EYA4O95677 639 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 CD52P31358 61 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 LRIT3Q3SXY7 679 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 RHPN2Q8IUC4 686 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 KCTD17Q8N5Z5 321 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 USP38Q8NB14 1042 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
CLCN1-203ENST00000455478 OSMRQ99650 979 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 MTRQ99707 1265 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 IFIH1Q9BYX4 1025 aaKnown RBP16.36■□□□□ 0.21
CLCN1-203ENST00000455478 CCSER1Q9C0I3 900 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
CLCN1-203ENST00000455478 NOC2LQ9Y3T9 749 aaKnown RBP16.36■□□□□ 0.21
CLCN1-203ENST00000455478 TCHHQ07283 1943 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 ABHD14A-ACY1A0A1B0GW23 586 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 USO1O60763 962 aaKnown RBP16.35■□□□□ 0.21
CLCN1-203ENST00000455478 BAIAP3O94812 1187 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 CYP11B2P19099 503 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 ARL2P36404 184 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
CLCN1-203ENST00000455478 CDC42EP1Q00587 391 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 LAMTOR4Q0VGL1 99 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 IKBKEQ14164 716 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 LRRC15Q8TF66 581 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
CLCN1-203ENST00000455478 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 MTIF3Q9H2K0 278 aaKnown RBP16.35■□□□□ 0.21
CLCN1-203ENST00000455478 ERVK-5Q9HDB9 667 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 PADI3Q9ULW8 664 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 MICAL3Q7RTP6 2002 aa16.35■□□□□ 0.21
CLCN1-203ENST00000455478 A0A087WZ62 844 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 ZBBXA8MT70 800 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 ASAP2O43150 1006 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 DARSP14868 501 aaKnown RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 EIF4BP23588 611 aaKnown RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 WDR5P61964 334 aaKnown RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 NUCB2P80303 420 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 KARSQ15046 597 aaKnown RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 SYMPKQ92797 1274 aaKnown RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 APBB2Q92870 758 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 CDK5RAP3Q96JB5 506 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 FDXACB1Q9BRP7 624 aaPredicted RBP16.34■□□□□ 0.21
CLCN1-203ENST00000455478 GPRC5CQ9NQ84 441 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 ST3GAL5Q9UNP4 418 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 COL4A3BPQ9Y5P4 624 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 SLC4A7Q9Y6M7 1214 aa16.34■□□□□ 0.21
CLCN1-203ENST00000455478 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
CLCN1-203ENST00000455478 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
CLCN1-203ENST00000455478 RPS6KA5O75582 802 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 SRGAP2CP0DJJ0 459 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 PAK2Q13177 524 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
CLCN1-203ENST00000455478 MAEAQ7L5Y9 396 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
CLCN1-203ENST00000455478 ZNF410Q86VK4 478 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.2
CLCN1-203ENST00000455478 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 ASAP3Q8TDY4 903 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 NLRP4Q96MN2 994 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 IFT122Q9HBG6 1241 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 PTPRSQ13332 1948 aa16.33■□□□□ 0.2
CLCN1-203ENST00000455478 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 GRXCR1A8MXD5 290 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 ENPP3O14638 875 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 CUTAO60888 179 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 EFCAB14O75071 495 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 PLA2G4BP0C869 781 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 PLCG1P19174 1290 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 GLRA2P23416 452 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 DEFB103AP81534 67 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 RINT1Q6NUQ1 792 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 C1orf186Q6ZWK4 172 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
CLCN1-203ENST00000455478 PCDHA7Q9UN72 937 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
CLCN1-203ENST00000455478 GPR182O15218 404 aa16.31■□□□□ 0.2
CLCN1-203ENST00000455478 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms