RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 AKNAD1Q5T1N1 836 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 CDCA2Q69YH5 1023 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 CDC42EP5Q6NZY7 148 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 ADAMTSL4Q6UY14 1074 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 ARHGAP27Q6ZUM4 889 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TOGARAM2Q6ZUX3 1019 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 HDXQ7Z353 690 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 FGD2Q7Z6J4 655 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 RAB44Q7Z6P3 723 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 FCHSD1Q86WN1 690 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TBC1D10CQ8IV04 446 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TEX11Q8IYF3 940 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TGFBRAP1Q8WUH2 860 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 GJA10Q969M2 543 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 FUBP3Q96I24 572 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TMX3Q96JJ7 454 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 LRGUKQ96M69 825 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 UBE2OQ9C0C9 1292 aaKnown RBP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TCF7L1Q9HCS4 588 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 USP40Q9NVE5 1235 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 MCM9Q9NXL9 1143 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 SAP30BPQ9UHR5 308 aaKnown RBP5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 DNMT3LQ9UJW3 386 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZBTB21Q9ULJ3 1066 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 LIMCH1Q9UPQ0 1083 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 SNCAIPQ9Y6H5 919 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 MYO3BQ8WXR4 1341 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 FOCADQ5VW36 1801 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
HMGB1P4-201ENST00000455362 ADAMTSL1Q8N6G6 1762 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 B4E1Z4 1266 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 J3QW42 95 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 FZD9O00144 591 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 GFRA2O00451 464 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 NBNO60934 754 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MT-CO1P00395 513 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 TP53P04637 393 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 GSTP1P09211 210 aaKnown RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CYP2D6P10635 497 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CD33P20138 364 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MCM5P33992 734 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CASP2P42575 452 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 RECQLP46063 649 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ANTXR2P58335 489 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 RASSF7Q02833 373 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MLLT1Q03111 559 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 TRDNQ13061 729 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 BIRC3Q13489 604 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CUL4AQ13619 759 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 TOB2Q14106 344 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ANKRD1Q15327 319 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 C12orf60Q5U649 245 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CIAPIN1Q6FI81 312 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 FOXR1Q6PIV2 292 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MFSD6Q6ZSS7 791 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 Q6ZUG5 572 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 HFE2Q6ZVN8 426 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 CHST3Q7LGC8 479 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 PNMA8AQ86V59 439 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF227Q86WZ6 799 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MAPKAPK5Q8IW41 473 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MB21D2Q8IYB1 491 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 TRIM22Q8IYM9 498 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 FBXL16Q8N461 479 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 AGBL3Q8NEM8 1001 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 NCOA7Q8NI08 942 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF775Q96BV0 537 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 PLPPR2Q96GM1 343 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 WNK4Q96J92 1243 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZSCAN31Q96LW9 406 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 MAGEB10Q96LZ2 347 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 TCEANC2Q96MN5 208 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 SELENOOQ9BVL4 669 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 RNF41Q9H4P4 317 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 SENP2Q9HC62 589 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 NLRC4Q9NPP4 1024 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 PCDHAC2Q9Y5I4 1007 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 WDR19Q8NEZ3 1342 aa5.94□□□□□ -1.46
HMGB1P4-201ENST00000455362 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 SOBPA7XYQ1 873 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 NOP56O00567 594 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 TIMM44O43615 452 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ORC4O43929 436 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 DNAJA2O60884 412 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 EPHX1P07099 455 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC3A2P08195 630 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PCP11498 1178 aaKnown RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 MMP14P50281 582 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 PLCD1P51178 756 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 EVCP57679 992 aa5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF280AP59817 542 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAPQ12884 760 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms