RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GATMP50440 423 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 PTGDRQ13258 359 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 CUL4AQ13619 759 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 SLC7A3Q8WY07 619 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 NLRP4Q96MN2 994 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 FDXACB1Q9BRP7 624 aaPredicted RBP27.79■■■□□ 2.04
MSH2-203ENST00000454849 EYSQ5T1H1 3165 aa27.79■■■□□ 2.04
MSH2-203ENST00000454849 MED24O75448 989 aa27.78■■■□□ 2.04
MSH2-203ENST00000454849 SPATA31C1P0DKV0 1188 aa27.78■■■□□ 2.04
MSH2-203ENST00000454849 DARSP14868 501 aaKnown RBP27.78■■■□□ 2.04
MSH2-203ENST00000454849 ERVK-21P61565 698 aa27.78■■■□□ 2.04
MSH2-203ENST00000454849 GRB10Q13322 594 aa27.78■■■□□ 2.04
MSH2-203ENST00000454849 SP7Q8TDD2 431 aaPredicted RBP27.78■■■□□ 2.04
MSH2-203ENST00000454849 EMC2Q15006 297 aa27.77■■■□□ 2.04
MSH2-203ENST00000454849 PAN2Q504Q3 1202 aaKnown RBP27.77■■■□□ 2.04
MSH2-203ENST00000454849 CATSPER3Q86XQ3 398 aa27.77■■■□□ 2.04
MSH2-203ENST00000454849 PRPF31Q8WWY3 499 aaKnown RBP27.77■■■□□ 2.04
MSH2-203ENST00000454849 DHX33Q9H6R0 707 aaKnown RBP27.77■■■□□ 2.04
MSH2-203ENST00000454849 PRDM6Q9NQX0 595 aa27.77■■■□□ 2.04
MSH2-203ENST00000454849 LRFN2Q9ULH4 789 aa27.77■■■□□ 2.04
MSH2-203ENST00000454849 TTC3P53804 2025 aa27.77■■■□□ 2.04
MSH2-203ENST00000454849 SRGAP2CP0DJJ0 459 aa27.76■■■□□ 2.03
MSH2-203ENST00000454849 GCOM2Q9BZD3 368 aaPredicted RBP27.76■■■□□ 2.03
MSH2-203ENST00000454849 LPXNO60711 386 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 DGKIO75912 1065 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 RFC5P40937 340 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 ORC2Q13416 577 aaPredicted RBP27.75■■■□□ 2.03
MSH2-203ENST00000454849 DSC3Q14574 896 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 ODR4Q5SWX8 454 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 POTEGQ6S5H5 508 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 NPAS4Q8IUM7 802 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 CRIPAKQ8N1N5 446 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 FIBCD1Q8N539 461 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 NEK9Q8TD19 979 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 CCDC43Q96MW1 224 aaKnown RBP27.75■■■□□ 2.03
MSH2-203ENST00000454849 JPH2Q9BR39 696 aaPredicted RBP27.75■■■□□ 2.03
MSH2-203ENST00000454849 RGS18Q9NS28 235 aa27.75■■■□□ 2.03
MSH2-203ENST00000454849 LYPLA2O95372 231 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 SARSP49591 514 aaKnown RBP27.74■■■□□ 2.03
MSH2-203ENST00000454849 BTG3Q14201 252 aaPredicted RBP27.74■■■□□ 2.03
MSH2-203ENST00000454849 IL17AQ16552 155 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 MAEAQ7L5Y9 396 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 FBXO22Q8NEZ5 403 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 XPNPEP1Q9NQW7 623 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.74■■■□□ 2.03
MSH2-203ENST00000454849 ANKEF1Q9NU02 776 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 PCDHB7Q9Y5E2 793 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 COL4A3BPQ9Y5P4 624 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 MTCH2Q9Y6C9 303 aa27.74■■■□□ 2.03
MSH2-203ENST00000454849 VPS37CA5D8V6 355 aaPredicted RBP27.73■■■□□ 2.03
MSH2-203ENST00000454849 PP2D1A8MPX8 630 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 C9IYK1 514 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 STAG3L1P0CL83 205 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 LAMTOR4Q0VGL1 99 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 EPC2Q52LR7 807 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 FAM102BQ5T8I3 360 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 SLC24A5Q71RS6 500 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 FERMT3Q86UX7 667 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 TMEM192Q8IY95 271 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 PSPC1Q8WXF1 523 aaKnown RBP27.73■■■□□ 2.03
MSH2-203ENST00000454849 MTRQ99707 1265 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 PRRC2BQ5JSZ5 2229 aaKnown RBP27.73■■■□□ 2.03
MSH2-203ENST00000454849 PRUNE2Q8WUY3 3088 aa27.73■■■□□ 2.03
MSH2-203ENST00000454849 ADGRA3Q8IWK6 1321 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 USO1O60763 962 aaKnown RBP27.72■■■□□ 2.03
MSH2-203ENST00000454849 CDC25AP30304 524 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 RARRES1P49788 294 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 ECM1Q16610 540 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 RNF169Q8NCN4 708 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 ERMNQ8TAM6 284 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 ZNF689Q96CS4 500 aaPredicted RBP27.72■■■□□ 2.03
MSH2-203ENST00000454849 POLR3CQ9BUI4 534 aaPredicted RBP27.72■■■□□ 2.03
MSH2-203ENST00000454849 RC3H2Q9HBD1 1191 aaKnown RBP27.72■■■□□ 2.03
MSH2-203ENST00000454849 TUFT1Q9NNX1 390 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 LRWD1Q9UFC0 647 aa27.72■■■□□ 2.03
MSH2-203ENST00000454849 GTPBP6O43824 516 aaPredicted RBP27.71■■■□□ 2.03
MSH2-203ENST00000454849 FGFR1P11362 822 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 ZSCAN20P17040 1043 aaPredicted RBP27.71■■■□□ 2.03
MSH2-203ENST00000454849 CCT6AP40227 531 aaKnown RBP27.71■■■□□ 2.03
MSH2-203ENST00000454849 FXR2P51116 673 aaKnown RBP eCLIP27.71■■■□□ 2.034e-12■■□□□ 13.9
MSH2-203ENST00000454849 RILPL1Q5EBL4 403 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 ZNF710Q8N1W2 664 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 IFT122Q9HBG6 1241 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 C1orf112Q9NSG2 853 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 PPME1Q9Y570 386 aa27.71■■■□□ 2.03
MSH2-203ENST00000454849 MRPL42Q9Y6G3 142 aaKnown RBP27.71■■■□□ 2.03
MSH2-203ENST00000454849 CTNNB1P35222 781 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 CDC42EP1Q00587 391 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 ZNF410Q86VK4 478 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 EXOC8Q8IYI6 725 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 ASAP3Q8TDY4 903 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 MINDY3Q9H8M7 445 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 ATP6V0A4Q9HBG4 840 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 GPRC5CQ9NQ84 441 aa27.7■■■□□ 2.02
MSH2-203ENST00000454849 TRANK1O15050 2925 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 TBKBP1A7MCY6 615 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 K7ELQ4 463 aaPredicted RBP27.69■■■□□ 2.02
MSH2-203ENST00000454849 CSPG5O95196 566 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 RPA1P27694 616 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 FAM189BP81408 668 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms