RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 FGFR1P11362 822 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 QARSP47897 775 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 NPEPPSP55786 919 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 TRIM29Q14134 588 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 NCAPH2Q6IBW4 605 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 ZNF579Q8NAF0 562 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 RGL1Q9NZL6 768 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 IGKV6-21A0A0C4DH24 114 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 TBKBP1A7MCY6 615 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 KCNA5P22460 613 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 KIF2CQ99661 725 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 NSUN3Q9H649 340 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 HCSTQ9UBK5 93 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 PLAGL2Q9UPG8 496 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 ATG2AQ2TAZ0 1938 aa18.45■□□□□ 0.54
NCKIPSD-208ENST00000454134 BRWD1Q9NSI6 2320 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 P4HBP07237 508 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 DNM2P50570 870 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 FAM189BP81408 668 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 SPIRE1Q08AE8 756 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 EPHA7Q15375 998 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 FAM43BQ6ZT52 329 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 EP400NLQ6ZTU2 488 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 KSR1Q8IVT5 923 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 ZNF710Q8N1W2 664 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 KLHL23Q8NBE8 558 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 DYDC2Q96IM9 177 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 ATP6V0A4Q9HBG4 840 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 CYP26B1Q9NR63 512 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 TMEM161AQ9NX61 479 aa18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 SUCLA2Q9P2R7 463 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-208ENST00000454134 FNDC1Q4ZHG4 1894 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 MYO7AQ13402 2215 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 A0A087WZ62 844 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 MAFO75444 373 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 ITGB1P05556 798 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 DNAJB1P25685 340 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 CAMK1Q14012 370 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 CTTNQ14247 550 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 CALCRLQ16602 461 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 SPOUT1Q5T280 376 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 RHPN2Q8IUC4 686 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 SLFN12Q8IYM2 578 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 P2RX5Q93086 422 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 CEP170P1Q96L14 293 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 FDXACB1Q9BRP7 624 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 LXNQ9BS40 222 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 GCOM2Q9BZD3 368 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 LMAN2LQ9H0V9 348 aa18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 BMP2KQ9NSY1 1161 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-208ENST00000454134 H3BQ06 376 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 ZBTB39O15060 712 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 DKC1O60832 514 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■□□□ 12.2
NCKIPSD-208ENST00000454134 ATP2B1P20020 1258 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 ECHDC2Q86YB7 292 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 RNF169Q8NCN4 708 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 SPPL3Q8TCT6 385 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 NLRP4Q96MN2 994 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 ELAC1Q9H777 363 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 RNF19AQ9NV58 838 aa18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-208ENST00000454134 NEMFO60524 1076 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 YWHABP31946 246 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 POLGP54098 1239 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 HYAL1Q12794 435 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 LEXMQ3ZCV2 418 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 TPH2Q8IWU9 490 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 C4orf19Q8IY42 314 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 TMEM143Q96AN5 459 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 C8orf76Q96K31 380 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 TTC12Q9H892 705 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 TYW1Q9NV66 732 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 PCDHA12Q9UN75 941 aa18.41■□□□□ 0.54
NCKIPSD-208ENST00000454134 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 IRS1P35568 1242 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 TXKP42681 527 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 CDC42EP1Q00587 391 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 SAFBQ15424 915 aaKnown RBP eCLIP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 NAALADL2Q58DX5 795 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 XKR9Q5GH70 373 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 POF1BQ8WVV4 589 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 SLC7A3Q8WY07 619 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 EIF2AK1Q9BQI3 630 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 JPH2Q9BR39 696 aaPredicted RBP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 LLPHQ9BRT6 129 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 TMEM60Q9H2L4 133 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 IGFLR1Q9H665 355 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 DHX33Q9H6R0 707 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 ZSWIM4Q9H7M6 989 aa18.4■□□□□ 0.54
NCKIPSD-208ENST00000454134 CLDND1Q9NY35 253 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms