RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
LYSMD3-202ENST00000453259 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
LYSMD3-202ENST00000453259 PCDHA10Q9Y5I2 948 aa16.2■□□□□ 0.18
LYSMD3-202ENST00000453259 HCFC2Q9Y5Z7 792 aa16.2■□□□□ 0.18
LYSMD3-202ENST00000453259 IRAK3Q9Y616 596 aa16.2■□□□□ 0.18
LYSMD3-202ENST00000453259 A0A0U1RQF3 1178 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 HIDE1A8MVS5 230 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 FAM86B1E9PN63 330 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 FAM86B2P0C5J1 330 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 CREB3L3Q68CJ9 461 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 LINC01465Q8N7H1 131 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 ZNF577Q9BSK1 485 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 TRAIPQ9BWF2 469 aa16.19■□□□□ 0.18
LYSMD3-202ENST00000453259 CFAP54Q96N23 3096 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 ZFHX2Q9C0A1 2572 aaPredicted RBP16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 C2orf71A6NGG8 1288 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 ZBTB43O43298 467 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 VTNP04004 478 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 ATP4AP20648 1035 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 CLCN5P51795 746 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 NLRP11P59045 1033 aaKnown RBP16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 TDRD5Q8NAT2 981 aaKnown RBP16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 CHST12Q9NRB3 414 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 HCSTQ9UBK5 93 aa16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 V9GY48 417 aaPredicted RBP16.18■□□□□ 0.18
LYSMD3-202ENST00000453259 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 WDR64B1ANS9 1081 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 SKIP12755 728 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 ZNF598Q86UK7 904 aaKnown RBP16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 PPFIBP1Q86W92 1011 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 TMEM169Q96HH4 297 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 PGBD1Q96JS3 809 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 POMKQ9H5K3 350 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 FAM86C1Q9NVL1 165 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 AKT3Q9Y243 479 aa16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
LYSMD3-202ENST00000453259 EVPLQ92817 2033 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 C2CD4DB7Z1M9 353 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 H0Y858 1186 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 CLASP2O75122 1294 aaKnown RBP16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 BRD1O95696 1058 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 CIITAP33076 1130 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 PFKFB3Q16875 520 aaPredicted RBP16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 CLLU1OSQ5K130 101 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 EFCAB12Q6NXP0 572 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 ESYT1Q9BSJ8 1104 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 ZMYND12Q9H0C1 365 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
LYSMD3-202ENST00000453259 PRR23AA6NEV1 266 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 OATP04181 439 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 GNA11P29992 359 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 SFNP31947 248 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 GPC3P51654 580 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 CLCN3P51790 818 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 PLXNA3P51805 1871 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 KRT32Q14532 448 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 TSGA10IPQ3SY00 556 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 ERMP1Q7Z2K6 904 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 RAB11FIP4Q86YS3 637 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 BICD2Q8TD16 824 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 RIT2Q99578 217 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 LRRC2Q9BYS8 371 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 GABBR1Q9UBS5 961 aa16.15■□□□□ 0.18
LYSMD3-202ENST00000453259 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 RAB27AP51159 221 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 BCAR1P56945 870 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 DDX53Q86TM3 631 aaKnown RBP16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 TMEM105Q8N8V8 129 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 RDM1Q8NG50 284 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 ACSF2Q96CM8 615 aaPredicted RBP16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 SCLT1Q96NL6 688 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 PPP1R16BQ96T49 567 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 APOL5Q9BWW9 433 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 INO80BQ9C086 356 aaPredicted RBP16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
LYSMD3-202ENST00000453259 MFSD1Q9H3U5 465 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms