RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SAMD14Q8IZD0 417 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 MIER2Q8N344 545 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 PPP1R35Q8TAP8 253 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 DIS3LQ8TF46 1054 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 TRAPPC12Q8WVT3 735 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ARL8AQ96BM9 186 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 TEKT5Q96M29 485 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLC9A7Q96T83 725 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 BAG1Q99933 345 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 NUP62CLQ9H1M0 184 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 BHMT2Q9H2M3 363 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 OLA1Q9NTK5 396 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 THG1LQ9NWX6 298 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 GMIPQ9P107 970 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 CEP72Q9P209 647 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 STAP2Q9UGK3 403 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 TBK1Q9UHD2 729 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF214Q9UL59 606 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 PA2G4Q9UQ80 394 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 BLACEA4D250 179 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 FRS3O43559 492 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 LEFTY1O75610 366 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SOD2P04179 222 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 POLBP06746 335 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLC3A2P08195 630 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 MYCLP12524 364 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATP1A3P13637 1013 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 GRIA2P42262 883 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 PAPOLAP51003 745 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 GP2P55259 537 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SCAND1P57086 179 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 DSG1Q02413 1049 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 PRKG1Q13976 671 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 STARD3Q14849 445 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLMAPQ14BN4 828 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 TAF5Q15542 800 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 MEA1Q16626 185 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 BBS9Q3SYG4 887 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 CYP27C1Q4G0S4 372 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 RNF220Q5VTB9 566 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 IZUMO3Q5VZ72 239 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 RFX8Q6ZV50 586 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 CYFIP1Q7L576 1253 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 MCM10Q7L590 875 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 HDXQ7Z353 690 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SDCCAG8Q86SQ7 713 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 HEATR4Q86WZ0 1026 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 NBPF5PQ86XG9 351 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 VSIG1Q86XK7 387 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 TOP6BLQ8N6T0 577 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF527Q8NB42 609 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 CLRN3Q8NCR9 226 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 PTPRN2Q92932 1015 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 HPS3Q969F9 1004 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATG4CQ96DT6 458 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 HIC2Q96JB3 615 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SPATA17Q96L03 361 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 TIGD1Q96MW7 591 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ADPGKQ9BRR6 497 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 DUSP23Q9BVJ7 150 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 CCDC68Q9H2F9 335 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 TMEM60Q9H2L4 133 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 DHX36Q9H2U1 1008 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZWILCHQ9H900 591 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 WASH6PQ9NQA3 447 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 SPTLC3Q9NUV7 552 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM86C1Q9NVL1 165 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 DCAF16Q9NXF7 216 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 AASSQ9UDR5 926 aa5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZC3H7BQ9UGR2 993 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 ANGEL1Q9UNK9 670 aaKnown RBP5.04□□□□□ -1.6
HMGB3P21-201ENST00000452483 RHPN2P1A8MT19 583 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 H0Y3Z8 333 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CBX4O00257 560 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 RTCAO00442 366 aaKnown RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 KPNA5O15131 536 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 IRAK2O43187 625 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 MGEA5O60502 916 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 TUSC2O75896 110 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 PRNPP04156 253 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 DESP17661 470 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 PIK3CBP42338 1070 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 TNNT3P45378 269 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CDK8P49336 464 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 KPNA1P52294 538 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CACNB3P54284 484 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 TPD52P55327 224 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ARL4CP56559 192 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 LRRC32Q14392 662 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 PKN2Q16513 984 aaKnown RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CLEC16AQ2KHT3 1053 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM209BQ5JX69 171 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATAT1Q5SQI0 421 aa5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM205BPQ63HN1 556 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms