RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 XBP1P17861 261 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 POU3F3P20264 500 aaPredicted RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 NEK4P51957 841 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 ANAPC15P60006 121 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 GPM6BQ13491 265 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 MTERF2Q49AM1 385 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 PIK3AP1Q6ZUJ8 805 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 RTN4RL1Q86UN2 441 aaPredicted RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 KIAA0319LQ8IZA0 1049 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 NME8Q8N427 588 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 DAGLBQ8NCG7 672 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 TMEM40Q8WWA1 233 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 FAM167AQ96KS9 214 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 SCLT1Q96NL6 688 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 SH2D3AQ9BRG2 576 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 PHF20Q9BVI0 1012 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 C22orf23Q9BZE7 217 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 TMX1Q9H3N1 280 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 DDX25Q9UHL0 483 aaKnown RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 CEP131Q9UPN4 1083 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 AKT3Q9Y243 479 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 NOC2LQ9Y3T9 749 aaKnown RBP9.78□□□□□ -0.84
RFX3-209ENST00000451859 STK36Q9NRP7 1315 aa9.78□□□□□ -0.84
RFX3-209ENST00000451859 MUC3AQ02505 3323 aa9.77□□□□□ -0.84
RFX3-209ENST00000451859 DENND3A2RUS2 1198 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 M0R2N6 131 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 SLC37A4O43826 429 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 MARCH6O60337 910 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 MGEA5O60502 916 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 CCNT1O60563 726 aaKnown RBP9.77□□□□□ -0.85
RFX3-209ENST00000451859 PSMD10O75832 226 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 JAK3P52333 1124 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 ANKRD1Q15327 319 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 ME3Q16798 604 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 Q4G0T1 1027 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 GALNT17Q6IS24 598 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 EFCAB12Q6NXP0 572 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 EP400NLQ6ZTU2 488 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 SAMD11Q96NU1 681 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 MAP7D2Q96T17 732 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 RIT2Q99578 217 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 FTHL17Q9BXU8 183 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 LRFN2Q9ULH4 789 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 ST3GAL5Q9UNP4 418 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 KDM3AQ9Y4C1 1321 aa9.77□□□□□ -0.85
RFX3-209ENST00000451859 BDP1A6H8Y1 2624 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 TDRD15B5MCY1 1934 aaKnown RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 JAK2O60674 1132 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 DGKIO75912 1065 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 SFNP31947 248 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 NLRP11P59045 1033 aaKnown RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 TBC1D8BQ0IIM8 1120 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 NR5A1Q13285 461 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 PTPROQ16827 1216 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 AAK1Q2M2I8 961 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 EARS2Q5JPH6 523 aaKnown RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 ETNPPLQ8TBG4 499 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 WASF1Q92558 559 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 HLA-CQ95604 372 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 MRPL38Q96DV4 380 aaKnown RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 UHRF1Q96T88 793 aaPredicted RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 ADAM2Q99965 735 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 NRBP2Q9NSY0 501 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 LMCD1Q9NZU5 365 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 MRPL42Q9Y6G3 142 aaKnown RBP9.76□□□□□ -0.85
RFX3-209ENST00000451859 SQORQ9Y6N5 450 aa9.76□□□□□ -0.85
RFX3-209ENST00000451859 CYP3A7-CYP3A51PA0A087WV96 503 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 DDX11L8A8MPP1 907 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 H3BNC9 293 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 EML1O00423 815 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 GRM6O15303 877 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 MAGEB2O15479 319 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 STAG3L1P0CL83 205 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 FDPSP14324 419 aaKnown RBP9.75□□□□□ -0.85
RFX3-209ENST00000451859 FGFR4P22455 802 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 KCNA5P22460 613 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 CYP3A7P24462 503 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 TMOD1P28289 359 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 KRT2P35908 639 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 CRYBB1P53674 252 aaPredicted RBP9.75□□□□□ -0.85
RFX3-209ENST00000451859 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 DRP2Q13474 957 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 SPOUT1Q5T280 376 aaKnown RBP9.75□□□□□ -0.85
RFX3-209ENST00000451859 PLA2G4FQ68DD2 849 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 NCAPH2Q6IBW4 605 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 MOXD1Q6UVY6 613 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 RNF169Q8NCN4 708 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 NSUN7Q8NE18 718 aaKnown RBP9.75□□□□□ -0.85
RFX3-209ENST00000451859 MBOAT7Q96N66 472 aa9.75□□□□□ -0.85
RFX3-209ENST00000451859 RC3H2Q9HBD1 1191 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms