RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 IRX3P78415 501 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 MRPL58Q14197 206 aaKnown RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 RTP5Q14D33 572 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZSCAN26Q16670 478 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 BEND3Q5T5X7 828 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 TMCO3Q6UWJ1 677 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 CWC27Q6UX04 472 aaKnown RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 RUFY4Q6ZNE9 571 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 FERMT3Q86UX7 667 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 KIAA0825Q8IV33 1275 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 TEX2Q8IWB9 1127 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 NEK11Q8NG66 645 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 HNRNPLLQ8WVV9 542 aaKnown RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 EVI5LQ96CN4 794 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 TEPSINQ96N21 525 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 MPHOSPH8Q99549 860 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 GP6Q9HCN6 339 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 PDLIM7Q9NR12 457 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 ECHDC1Q9NTX5 307 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 ARGLU1Q9NWB6 273 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 TRMT1Q9NXH9 659 aaKnown RBP4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 HMG20BQ9P0W2 317 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 LCMT1Q9UIC8 334 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 CFAP45Q9UL16 551 aa4.74□□□□□ -1.65
HMGB3P22-202ENST00000451823 UTYO14607 1347 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 USP6P35125 1406 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 AGLP35573 1532 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MARF1Q9Y4F3 1742 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 FAM237AA0A1B0GTK4 181 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 VWA3AA6NCI4 1184 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 GOLGA6L4A6NEF3 574 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 H3BQF6 201 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 IKBKBO14920 756 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 FGF10O15520 208 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MYO1BO43795 1136 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 PFKFB2O60825 505 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ALDH1L1O75891 902 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 SEC31AO94979 1220 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MAP4K4O95819 1239 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 HOXB7P09629 217 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 NCAM1P13591 858 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZKSCAN1P17029 563 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 GUCY2CP25092 1073 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 TACR1P25103 407 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ACTN2P35609 894 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 SMC1AQ14683 1233 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 BRD3Q15059 726 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZYXQ15942 572 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZXDCQ2QGD7 858 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ICE2Q659A1 982 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 BLOC1S2Q6QNY1 142 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 UNC5AQ6ZN44 842 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 KRBA2Q6ZNG9 492 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 TICAM2Q86XR7 235 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 CCAR1Q8IX12 1150 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 CEP57L1Q8IYX8 460 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 AOPEPQ8N6M6 819 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MSANTD4Q8NCY6 345 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 NLGN2Q8NFZ4 835 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 BICD2Q8TD16 824 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 FNIP1Q8TF40 1166 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZNF526Q8TF50 670 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 UBXN4Q92575 508 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 RABGGTAQ92696 567 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 PTCHD1Q96NR3 888 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 BDH2Q9BUT1 245 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 STK31Q9BXU1 1019 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 XPO4Q9C0E2 1151 aaKnown RBP4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 RXFP1Q9HBX9 757 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 RSPH14Q9UHP6 348 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 RAB21Q9UL25 225 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 MRFAP1Q9Y605 127 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 CEMIPQ8WUJ3 1361 aa4.73□□□□□ -1.65
HMGB3P22-202ENST00000451823 SLIT1O75093 1534 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 DDX60Q8IY21 1712 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 LAMA4Q16363 1823 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 CCDC151A5D8V7 595 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 JAK2O60674 1132 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 DTNBO60941 627 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 TAF5LO75529 589 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 CTDNEP1O95476 244 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ADRB1P08588 477 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 IFIT2P09913 472 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 INSRRP14616 1297 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 SFPQP23246 707 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 MAGEA9P43362 315 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 GSCP56915 257 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 CAP1Q01518 475 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 POU4F1Q01851 419 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 GPS2Q13227 327 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 KRT32Q14532 448 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 PPP2R5DQ14738 602 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 HSP90AB2PQ58FF8 381 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 LDLRAD1Q5T700 205 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 NT5DC1Q5TFE4 455 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms