RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 MYO9BQ13459 2157 aa13.41□□□□□ -0.26
SMPD4-212ENST00000451542 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
SMPD4-212ENST00000451542 UBA7P41226 1012 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 DEFB103AP81534 67 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 NCBP1Q09161 790 aaKnown RBP13.4□□□□□ -0.26
SMPD4-212ENST00000451542 RESTQ13127 1097 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMPD4-212ENST00000451542 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 TOP1MTQ969P6 601 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 ZNF576Q9H609 170 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
SMPD4-212ENST00000451542 A0A087WZ62 844 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 ENPP3O14638 875 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 USO1O60763 962 aaKnown RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 UPP2O95045 317 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 PBX2P40425 430 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 PHKA2P46019 1235 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 RABGGTBP53611 331 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.279e-6■■□□□ 13.3
SMPD4-212ENST00000451542 ZRSR1Q15695 479 aaKnown RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 FAM117BQ6P1L5 589 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 SRGAP1Q7Z6B7 1085 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 TMEM143Q96AN5 459 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 FDXACB1Q9BRP7 624 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 NKX2-4Q9H2Z4 354 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 CHST12Q9NRB3 414 aa13.39□□□□□ -0.27
SMPD4-212ENST00000451542 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
SMPD4-212ENST00000451542 ZBTB39O15060 712 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 CA3P07451 260 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 SKIP12755 728 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 TXLNAP40222 546 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 LAMTOR4Q0VGL1 99 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-212ENST00000451542 DRP2Q13474 957 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 SLC24A5Q71RS6 500 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 NPAS4Q8IUM7 802 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 GAS2L1Q99501 681 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-212ENST00000451542 ADAM2Q99965 735 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 TTC3P53804 2025 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 SIP14410 1827 aa13.38□□□□□ -0.27
SMPD4-212ENST00000451542 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 HOXA2O43364 376 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 ERLIN2O94905 339 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 EYA4O95677 639 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 CYP11B2P19099 503 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 STK38Q15208 465 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 TCTN1Q2MV58 587 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 CABP7Q86V35 215 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 RNF149Q8NC42 400 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 ZNF668Q96K58 619 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 IFT74Q96LB3 600 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 FAM161BQ96MY7 647 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 RGS18Q9NS28 235 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 MTMR10Q9NXD2 777 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 CCDC39Q9UFE4 941 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
SMPD4-212ENST00000451542 GBF1Q92538 1859 aa13.37□□□□□ -0.27
SMPD4-212ENST00000451542 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
SMPD4-212ENST00000451542 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-212ENST00000451542 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
SMPD4-212ENST00000451542 IL17AQ16552 155 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 FAM102BQ5T8I3 360 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 Q7L0L9 218 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
SMPD4-212ENST00000451542 ZBTB8OSQ8IWT0 167 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms