RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TARBP2Q15633 366 aaKnown RBP30.55■■■□□ 2.48
USP42-204ENST00000451154 SMAD2Q15796 467 aaKnown RBP30.55■■■□□ 2.48
USP42-204ENST00000451154 COLGALT1Q8NBJ5 622 aa30.55■■■□□ 2.48
USP42-204ENST00000451154 RDM1Q8NG50 284 aa30.55■■■□□ 2.48
USP42-204ENST00000451154 C19orf67A6NJJ6 358 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 DTNBO60941 627 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 FGF18O76093 207 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 STBD1O95210 358 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 FGFR4P22455 802 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 DRP2Q13474 957 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 NONOQ15233 471 aaKnown RBP eCLIP30.54■■■□□ 2.48
USP42-204ENST00000451154 INF2Q27J81 1249 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 MTERF2Q49AM1 385 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 GALNT17Q6IS24 598 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 B3GNT9Q6UX72 402 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 THNSL1Q8IYQ7 743 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 ZNF710Q8N1W2 664 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 EFHBQ8N7U6 833 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 ETNPPLQ8TBG4 499 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 MBOAT7Q96N66 472 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 SCLT1Q96NL6 688 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 SH2D3AQ9BRG2 576 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 NIFKQ9BYG3 293 aaKnown RBP30.54■■■□□ 2.48
USP42-204ENST00000451154 RNF19AQ9NV58 838 aa30.54■■■□□ 2.48
USP42-204ENST00000451154 SEPT9Q9UHD8 586 aaPredicted RBP30.54■■■□□ 2.48
USP42-204ENST00000451154 CSDE1O75534 798 aaKnown RBP30.53■■■□□ 2.48
USP42-204ENST00000451154 ALADP13716 330 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 DARSP14868 501 aaKnown RBP30.53■■■□□ 2.48
USP42-204ENST00000451154 SCRN1Q12765 414 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 SMAD4Q13485 552 aaKnown RBP30.53■■■□□ 2.48
USP42-204ENST00000451154 LRRC55Q6ZSA7 311 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 NLRP7Q8WX94 980 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 MSLNLQ96KJ4 702 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 CASD1Q96PB1 797 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 TLE6Q9H808 572 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 CLEC1BQ9P126 229 aa30.53■■■□□ 2.48
USP42-204ENST00000451154 DDX25Q9UHL0 483 aaKnown RBP30.53■■■□□ 2.48
USP42-204ENST00000451154 DDX11L8A8MPP1 907 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 PER2O15055 1255 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 ERVFC1P60507 584 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 UBE3AQ05086 875 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 XKR3Q5GH77 459 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 ECHDC2Q86YB7 292 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 FAM177A1Q8N128 213 aaPredicted RBP30.52■■■□□ 2.48
USP42-204ENST00000451154 CEP89Q96ST8 783 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 TMEM117Q9H0C3 514 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 TLR9Q9NR96 1032 aa30.52■■■□□ 2.48
USP42-204ENST00000451154 MOXD1Q6UVY6 613 aa30.51■■■□□ 2.47
USP42-204ENST00000451154 KRT25Q7Z3Z0 450 aa30.51■■■□□ 2.47
USP42-204ENST00000451154 RNF169Q8NCN4 708 aa30.51■■■□□ 2.47
USP42-204ENST00000451154 SLC37A4O43826 429 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 LAG3P18627 525 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 LETM2Q2VYF4 491 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 FAM122AQ96E09 287 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 PHF20Q9BVI0 1012 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 SLKQ9H2G2 1235 aaPredicted RBP30.5■■■□□ 2.47
USP42-204ENST00000451154 GJB4Q9NTQ9 266 aa30.5■■■□□ 2.47
USP42-204ENST00000451154 EML1O00423 815 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 HOXA2O43364 376 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 DCXO43602 365 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 GLP2RO95838 553 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 PLA2G5P39877 138 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 CSPP1Q1MSJ5 1256 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 TPCN1Q9ULQ1 816 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 BARX2Q9UMQ3 279 aaPredicted RBP30.49■■■□□ 2.47
USP42-204ENST00000451154 HCN4Q9Y3Q4 1203 aa30.49■■■□□ 2.47
USP42-204ENST00000451154 CDKL5O76039 1030 aa30.48■■■□□ 2.47
USP42-204ENST00000451154 EYA4O95677 639 aa30.48■■■□□ 2.47
USP42-204ENST00000451154 ABI1Q8IZP0 508 aa30.48■■■□□ 2.47
USP42-204ENST00000451154 GCOM2Q9BZD3 368 aaPredicted RBP30.48■■■□□ 2.47
USP42-204ENST00000451154 IGKV6-21A0A0C4DH24 114 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 A0A0U1RQF3 1178 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 CCDC194A0A1B0GVG4 234 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 PBX3P40426 434 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 DNM2P50570 870 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 RBM10P98175 930 aaKnown RBP30.47■■■□□ 2.47
USP42-204ENST00000451154 CLLU1OSQ5K130 101 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 KCNT2Q6UVM3 1135 aa30.47■■■□□ 2.47
USP42-204ENST00000451154 SUCLA2Q9P2R7 463 aaPredicted RBP30.47■■■□□ 2.47
USP42-204ENST00000451154 A0A087WZ62 844 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 PRR33A8MZF0 331 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 FSCN2O14926 492 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 PFKFB2O60825 505 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 NEFLP07196 543 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 PSMC5P62195 406 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 CDC42EP1Q00587 391 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 COASYQ13057 564 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 ANO5Q75V66 913 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 ZNF598Q86UK7 904 aaKnown RBP30.46■■■□□ 2.47
USP42-204ENST00000451154 OXER1Q8TDS5 423 aa30.46■■■□□ 2.47
USP42-204ENST00000451154 MRPS27Q92552 414 aaKnown RBP30.46■■■□□ 2.47
USP42-204ENST00000451154 POP1Q99575 1024 aaKnown RBP30.46■■■□□ 2.47
USP42-204ENST00000451154 FDXACB1Q9BRP7 624 aaPredicted RBP30.46■■■□□ 2.47
USP42-204ENST00000451154 PUF60Q9UHX1 559 aaKnown RBP30.46■■■□□ 2.47
USP42-204ENST00000451154 PLCB3Q01970 1234 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 PLPP4Q5VZY2 271 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 PLA2G4FQ68DD2 849 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 NEK8Q86SG6 692 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 SMRP1Q8NCR6 262 aa30.45■■■□□ 2.47
USP42-204ENST00000451154 HELQQ8TDG4 1101 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms