RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ZNF215Q9UL58 517 aaPredicted RBP14.07□□□□□ -0.16
HLA-DRB9-201ENST00000449413 BECN2A8MW95 431 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 PSMA7O14818 248 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SEPT4O43236 478 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SYN1P17600 705 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 RFC5P40937 340 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CPT1AP50416 773 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DGKDQ16760 1214 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MCPH1Q8NEM0 835 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 FGFBP2Q9BYJ0 223 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 XPNPEP1Q9NQW7 623 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 NRBP2Q9NSY0 501 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 Q9Y3F1 56 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 PCDHA2Q9Y5H9 948 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 UBE4BO95155 1302 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 COL1A2P08123 1366 aa14.06□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 A6NJR5 290 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DYNC1LI2O43237 492 aaPredicted RBP14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DUSP11O75319 330 aaKnown RBP14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 F2P00734 622 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 NCAPHQ15003 741 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TARBP2Q15633 366 aaKnown RBP14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 UVSSAQ2YD98 709 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GUF1Q8N442 669 aaKnown RBP14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GLIS3Q8NEA6 775 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 NELFBQ8WX92 580 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 C16orf70Q9BSU1 422 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 AP5M1Q9H0R1 490 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 RWDD2AQ9UIY3 292 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 ALPK3Q96L96 1907 aa14.05□□□□□ -0.16
HLA-DRB9-201ENST00000449413 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 K7ENM7 598 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 HBP1O60381 514 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 PLS3P13797 630 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CCND3P30281 292 aaPredicted RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TPM4P67936 248 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 BRDTQ58F21 947 aaPredicted RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 ODR4Q5SWX8 454 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MAEAQ7L5Y9 396 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 FAM178BQ8IXR5 827 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MYCT1Q8N699 235 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SLC7A3Q8WY07 619 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 KIFAP3Q92845 792 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DHTKD1Q96HY7 919 aaPredicted RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 POLR3FQ9H1D9 316 aaPredicted RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 UPF3AQ9H1J1 476 aaKnown RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 C11orf49Q9H6J7 331 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MRPL44Q9H9J2 332 aaKnown RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 PDLIM7Q9NR12 457 aa14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 LARSQ9P2J5 1176 aaKnown RBP14.04□□□□□ -0.16
HLA-DRB9-201ENST00000449413 BICDL2A1A5D9 508 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TRIM49BA6NDI0 452 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 H3BRB1 525 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MAFO75444 373 aaPredicted RBP14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 KIF20AO95235 890 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GCNT3O95395 438 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MYBP10242 640 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 RARBP10826 455 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CCNE1P24864 410 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CNGA1P29973 690 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 CASP5P51878 434 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 STX17P56962 302 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 GJA9P57773 515 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 RTP1P59025 263 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TBC1D8BQ0IIM8 1120 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 DMP1Q13316 513 aaPredicted RBP14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 LRRC41Q15345 812 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 BMT2Q1RMZ1 405 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 EPM2AIP1Q7L775 607 aaPredicted RBP14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 P2RX5Q93086 422 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 MED15Q96RN5 788 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 FIZ1Q96SL8 496 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 TUT1Q9H6E5 874 aaKnown RBP14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 NFE2L3Q9Y4A8 694 aa14.03□□□□□ -0.16
HLA-DRB9-201ENST00000449413 ZMYM2Q9UBW7 1377 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms