RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 ANKRD20A3Q5VUR7 823 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 CEP63Q96MT8 703 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 CHORDC1Q9UHD1 332 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 PALM3A6NDB9 673 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 KIF3CO14782 793 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 SNX3O60493 162 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 RASA1P20936 1047 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 ECM1Q16610 540 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 ARHGAP44Q17R89 818 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 SBK1Q52WX2 424 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 DAGLBQ8NCG7 672 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
TRAK1-206ENST00000449246 SH3GL3Q99963 347 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 GCNT4Q9P109 453 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 UTRNP46939 3433 aa12.78□□□□□ -0.36
TRAK1-206ENST00000449246 RARAP10276 462 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.36
TRAK1-206ENST00000449246 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 ARHGEF2Q92974 986 aaKnown RBP12.77□□□□□ -0.36
TRAK1-206ENST00000449246 EYA3Q99504 573 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 GANQ9H2C0 597 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 TAOK3Q9H2K8 898 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 KLHL14Q9P2G3 628 aa12.77□□□□□ -0.36
TRAK1-206ENST00000449246 CES2O00748 559 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 STX2P32856 288 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 MXRA7P84157 204 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
TRAK1-206ENST00000449246 NFIXQ14938 502 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 RBBP5Q15291 538 aaKnown RBP12.77□□□□□ -0.37
TRAK1-206ENST00000449246 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 TRIM7Q9C029 511 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 TMEM120BA0PK00 339 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 POTECB2RU33 542 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 MEIS1O00470 390 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 AGTP01019 485 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 PLA2G4BP0C869 781 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 CREB1P16220 341 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 PON1P27169 355 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 ADCY7P51828 1080 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 SESN3P58005 492 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 RIPK1Q13546 671 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
TRAK1-206ENST00000449246 FBF1Q8TES7 1133 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.372e-14■■■■■ 115.4
TRAK1-206ENST00000449246 CTTNBP2NLQ9P2B4 639 aa12.77□□□□□ -0.37
TRAK1-206ENST00000449246 DDX25Q9UHL0 483 aaKnown RBP12.77□□□□□ -0.37
TRAK1-206ENST00000449246 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.374e-15■□□□□ 9.4
TRAK1-206ENST00000449246 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
TRAK1-206ENST00000449246 KCNJ1P48048 391 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 COBLL1Q53SF7 1204 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 PGM2Q96G03 612 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 AFF2P51816 1311 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 GRIK3Q13003 919 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 MIS18BP1Q6P0N0 1132 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 INTS8Q75QN2 995 aaKnown RBP12.76□□□□□ -0.37
TRAK1-206ENST00000449246 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
TRAK1-206ENST00000449246 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
TRAK1-206ENST00000449246 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
TRAK1-206ENST00000449246 CDK8P49336 464 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 VPS41P49754 854 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 PTENP60484 403 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 RNASELQ05823 741 aaKnown RBP12.75□□□□□ -0.37
TRAK1-206ENST00000449246 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAK1-206ENST00000449246 SNX1Q13596 522 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 SPATA21Q7Z572 469 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 ADAM7Q9H2U9 754 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 LRRN2O75325 713 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 GBP1P32455 592 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 CTCFP49711 727 aaPredicted RBP12.75□□□□□ -0.37
TRAK1-206ENST00000449246 PICALMQ13492 652 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 CNGA2Q16280 664 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
TRAK1-206ENST00000449246 DUPD1Q68J44 220 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms