RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 SFR1Q86XK3 245 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 RETREG2Q8NC44 543 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 GLT1D1Q96MS3 346 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 POLR3FQ9H1D9 316 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-203ENST00000449049 C17orf75Q9HAS0 396 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 POLD4Q9HCU8 107 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 OLFML3Q9NRN5 406 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 GTF2IRD1Q9UHL9 959 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
SHMT2-203ENST00000449049 SFI1A8K8P3 1242 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 PLS3P13797 630 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-203ENST00000449049 ISM2Q6H9L7 571 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 LRSAM1Q6UWE0 723 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 PPP1R13LQ8WUF5 828 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 TCP11Q8WWU5 503 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 GTPBP4Q9BZE4 634 aaKnown RBP15.55■□□□□ 0.08
SHMT2-203ENST00000449049 ZHX3Q9H4I2 956 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 C17orf102A2RUQ5 167 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 GNAT1P11488 350 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 GJA8P48165 433 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 PTPN11Q06124 597 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-203ENST00000449049 DRP2Q13474 957 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 ITGA7Q13683 1181 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 STX1AQ16623 288 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 FAM26FQ5R3K3 315 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 IER5Q5VY09 327 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 EFCAB12Q6NXP0 572 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 LRRC71Q8N4P6 559 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 MYCT1Q8N699 235 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 HPS3Q969F9 1004 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 TMEM143Q96AN5 459 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 ZBTB10Q96DT7 871 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 FIZ1Q96SL8 496 aa15.55■□□□□ 0.08
SHMT2-203ENST00000449049 LARSQ9P2J5 1176 aaKnown RBP15.55■□□□□ 0.08
SHMT2-203ENST00000449049 MYH11P35749 1972 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-203ENST00000449049 STK4Q13043 487 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 KIAA0895Q8NCT3 520 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 SUGCTQ9HAC7 445 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 GDAQ9Y2T3 454 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 CENPFP49454 3210 aa15.54■□□□□ 0.08
SHMT2-203ENST00000449049 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
SHMT2-203ENST00000449049 CAPN2P17655 700 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 CLCN3P51790 818 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 DPCR1Q3MIW9 517 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 METTL13Q8N6R0 699 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 ASAP3Q8TDY4 903 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 BSNDQ8WZ55 320 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 STARD7Q9NQZ5 370 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 ANO10Q9NW15 660 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-203ENST00000449049 SMIM35A0A1B0GVV1 85 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 GLRA2P23416 452 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 DNM2P50570 870 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 ANKLE1Q8NAG6 615 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 MLKLQ8NB16 471 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 SPIRE2Q8WWL2 714 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 PSPC1Q8WXF1 523 aaKnown RBP15.53■□□□□ 0.08
SHMT2-203ENST00000449049 NTPCRQ9BSD7 190 aaKnown RBP15.53■□□□□ 0.08
SHMT2-203ENST00000449049 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 SLC39A2Q9NP94 309 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 TBC1D7Q9P0N9 293 aa15.53■□□□□ 0.08
SHMT2-203ENST00000449049 TREHO43280 583 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 TFRCP02786 760 aaKnown RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 TMOD1P28289 359 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 NPTX2P47972 431 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 NCKAP1LP55160 1127 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 PEX3P56589 373 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 ZNF200P98182 395 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 DMP1Q13316 513 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 MXD4Q14582 209 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 GDF6Q6KF10 455 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 FAM178BQ8IXR5 827 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 SMYD4Q8IYR2 804 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 VTI1AQ96AJ9 217 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 SEZ6LQ9BYH1 1024 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 MRPL44Q9H9J2 332 aaKnown RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 SUCLA2Q9P2R7 463 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-203ENST00000449049 KCNG1Q9UIX4 513 aa15.52■□□□□ 0.08
SHMT2-203ENST00000449049 KAT6AQ92794 2004 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 CYP2C9P11712 490 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 NAMPTP43490 491 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 PPP2R5AQ15172 486 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 FAM47CQ5HY64 1035 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 EPM2AIP1Q7L775 607 aaPredicted RBP15.52■□□□□ 0.07
SHMT2-203ENST00000449049 KIAA0319LQ8IZA0 1049 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 SLC17A8Q8NDX2 589 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 GLIS3Q8NEA6 775 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 PRPF31Q8WWY3 499 aaKnown RBP15.52■□□□□ 0.07
SHMT2-203ENST00000449049 KCNN1Q92952 543 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 IFT74Q96LB3 600 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 STRA6Q9BX79 667 aa15.52■□□□□ 0.07
SHMT2-203ENST00000449049 ST6GALNAC4Q9H4F1 302 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms