RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GPC3P51654 580 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 TBC1D8BQ0IIM8 1120 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 NPY5RQ15761 445 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 THNSL1Q8IYQ7 743 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 SCLT1Q96NL6 688 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 C22orf23Q9BZE7 217 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 RNF19AQ9NV58 838 aa31.88■■■□□ 2.69
CBX4-202ENST00000448310 GLP2RO95838 553 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 FGFR4P22455 802 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 DRP2Q13474 957 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 SH2D3AQ9BRG2 576 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 TM6SF1Q9BZW5 370 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 TLR9Q9NR96 1032 aa31.87■■■□□ 2.69
CBX4-202ENST00000448310 SEPT9Q9UHD8 586 aaPredicted RBP31.87■■■□□ 2.69
CBX4-202ENST00000448310 BARX2Q9UMQ3 279 aaPredicted RBP31.87■■■□□ 2.69
CBX4-202ENST00000448310 CYP3A7-CYP3A51PA0A087WV96 503 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 PRR33A8MZF0 331 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 PER2O15055 1255 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 ZSCAN20P17040 1043 aaPredicted RBP31.86■■■□□ 2.69
CBX4-202ENST00000448310 CYP3A7P24462 503 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 ERVFC1P60507 584 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 UBE3AQ05086 875 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 TARBP2Q15633 366 aaKnown RBP31.86■■■□□ 2.69
CBX4-202ENST00000448310 MTERF2Q49AM1 385 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 DAGLBQ8NCG7 672 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 TMEM117Q9H0C3 514 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 TLE6Q9H808 572 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 PDRG1Q9NUG6 133 aa31.86■■■□□ 2.69
CBX4-202ENST00000448310 DARSP14868 501 aaKnown RBP31.85■■■□□ 2.69
CBX4-202ENST00000448310 RBM10P98175 930 aaKnown RBP31.85■■■□□ 2.69
CBX4-202ENST00000448310 LRRC55Q6ZSA7 311 aa31.85■■■□□ 2.69
CBX4-202ENST00000448310 RNF169Q8NCN4 708 aa31.85■■■□□ 2.69
CBX4-202ENST00000448310 NLRP7Q8WX94 980 aa31.85■■■□□ 2.69
CBX4-202ENST00000448310 CASD1Q96PB1 797 aa31.85■■■□□ 2.69
CBX4-202ENST00000448310 KCNJ14Q9UNX9 436 aa31.85■■■□□ 2.69
CBX4-202ENST00000448310 DTNBO60941 627 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 CSDE1O75534 798 aaKnown RBP31.84■■■□□ 2.69
CBX4-202ENST00000448310 STBD1O95210 358 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 LAG3P18627 525 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 INF2Q27J81 1249 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 CPLX2Q6PUV4 134 aaKnown RBP31.84■■■□□ 2.69
CBX4-202ENST00000448310 B3GNT9Q6UX72 402 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 ECHDC2Q86YB7 292 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 RDM1Q8NG50 284 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 ETNPPLQ8TBG4 499 aa31.84■■■□□ 2.69
CBX4-202ENST00000448310 POP1Q99575 1024 aaKnown RBP31.84■■■□□ 2.69
CBX4-202ENST00000448310 EYA4O95677 639 aa31.83■■■□□ 2.69
CBX4-202ENST00000448310 PBX3P40426 434 aa31.83■■■□□ 2.69
CBX4-202ENST00000448310 NONOQ15233 471 aaKnown RBP eCLIP31.83■■■□□ 2.691e-9■■■□□ 18.4
CBX4-202ENST00000448310 MBOAT7Q96N66 472 aa31.83■■■□□ 2.69
CBX4-202ENST00000448310 CSPP1Q1MSJ5 1256 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 XKR3Q5GH77 459 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 ABI1Q8IZP0 508 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 ZNF710Q8N1W2 664 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 SMRP1Q8NCR6 262 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 CEP89Q96ST8 783 aa31.82■■■□□ 2.68
CBX4-202ENST00000448310 NIFKQ9BYG3 293 aaKnown RBP31.82■■■□□ 2.68
CBX4-202ENST00000448310 DDX25Q9UHL0 483 aaKnown RBP31.82■■■□□ 2.68
CBX4-202ENST00000448310 HOXA2O43364 376 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 SLC37A4O43826 429 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 SCRN1Q12765 414 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 COASYQ13057 564 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 PLPP4Q5VZY2 271 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 GALNT17Q6IS24 598 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 MOXD1Q6UVY6 613 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 VN1R2Q8NFZ6 395 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 MUTYHQ9UIF7 546 aa31.81■■■□□ 2.68
CBX4-202ENST00000448310 FSCN2O14926 492 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 LETM2Q2VYF4 491 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 CLLU1OSQ5K130 101 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 KCNT2Q6UVM3 1135 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 KRT25Q7Z3Z0 450 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 LRRC43Q8N309 656 aa31.8■■■□□ 2.68
CBX4-202ENST00000448310 MRPS27Q92552 414 aaKnown RBP31.8■■■□□ 2.68
CBX4-202ENST00000448310 ARIH1Q9Y4X5 557 aaPredicted RBP31.8■■■□□ 2.68
CBX4-202ENST00000448310 DDX11L8A8MPP1 907 aa31.79■■■□□ 2.68
CBX4-202ENST00000448310 DUSP6Q16828 381 aa31.79■■■□□ 2.68
CBX4-202ENST00000448310 RNF135Q8IUD6 432 aa31.79■■■□□ 2.68
CBX4-202ENST00000448310 GJB4Q9NTQ9 266 aa31.79■■■□□ 2.68
CBX4-202ENST00000448310 USP15Q9Y4E8 981 aaPredicted RBP31.79■■■□□ 2.68
CBX4-202ENST00000448310 MUC6Q6W4X9 2439 aa31.79■■■□□ 2.68
CBX4-202ENST00000448310 A0A087WZ62 844 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 EML1O00423 815 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 ATF7P17544 494 aaPredicted RBP31.78■■■□□ 2.68
CBX4-202ENST00000448310 PLCB3Q01970 1234 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 ZNF598Q86UK7 904 aaKnown RBP31.78■■■□□ 2.68
CBX4-202ENST00000448310 HELQQ8TDG4 1101 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 ZNF558Q96NG5 402 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 FDXACB1Q9BRP7 624 aaPredicted RBP31.78■■■□□ 2.68
CBX4-202ENST00000448310 PHF20Q9BVI0 1012 aa31.78■■■□□ 2.68
CBX4-202ENST00000448310 GCOM2Q9BZD3 368 aaPredicted RBP31.78■■■□□ 2.68
CBX4-202ENST00000448310 IGKV6-21A0A0C4DH24 114 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 A0A0U1RQF3 1178 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 PLA2G4FQ68DD2 849 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 ANO5Q75V66 913 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 FAM177A1Q8N128 213 aaPredicted RBP31.77■■■□□ 2.68
CBX4-202ENST00000448310 TCF25Q9BQ70 676 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 ENTPD7Q9NQZ7 604 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 LZTS1Q9Y250 596 aa31.77■■■□□ 2.68
CBX4-202ENST00000448310 TRIOO75962 3097 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms