RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CDHR5Q9HBB8 845 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 ASPMQ8IZT6 3477 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-203ENST00000447360 KRBA1A5PL33 1030 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 IGHDP01880 384 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 SP9P0CG40 484 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 RFX1P22670 979 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 KLRC1P26715 233 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 STAT5BP51692 787 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 POLGP54098 1239 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-203ENST00000447360 DSC3Q14574 896 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 ST3GAL2Q16842 350 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 ANKRD45Q5TZF3 282 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 TMC5Q6UXY8 1006 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 C15orf39Q6ZRI6 1047 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 FAM228AQ86W67 206 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 PPFIBP1Q86W92 1011 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 C1orf210Q8IVY1 113 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 DCLK2Q8N568 766 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 SUMF1Q8NBK3 374 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 SLC22A17Q8WUG5 538 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 RIN2Q8WYP3 895 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-203ENST00000447360 RSPH1Q8WYR4 309 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 NXPE3Q969Y0 559 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 TMEM169Q96HH4 297 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 DSCC1Q9BVC3 393 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 SFXN1Q9H9B4 322 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 JADE2Q9NQC1 790 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 RNF19AQ9NV58 838 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 DLGAP2Q9P1A6 1054 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 SLC9A2Q9UBY0 812 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 UBIAD1Q9Y5Z9 338 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 KAT6AQ92794 2004 aa8.1□□□□□ -1.11
LRRC28-203ENST00000447360 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
LRRC28-203ENST00000447360 PRR5-ARHGAP8B1AHC4 643 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 HBP1O60381 514 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 KINO60870 393 aaKnown RBP8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ATG7O95352 703 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 CFHP08603 1231 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 CTSAP10619 480 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 EPCAMP16422 314 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ZSCAN20P17040 1043 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-203ENST00000447360 SDSP20132 328 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 CA8P35219 290 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ATXN1P54253 815 aaKnown RBP8.09□□□□□ -1.11
LRRC28-203ENST00000447360 BCAR1P56945 870 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ACTR2P61160 394 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ARHGAP8P85298 464 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 TROAPQ12815 778 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 AAMPQ13685 434 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 KIZQ2M2Z5 673 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 LETM2Q2VYF4 491 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 VPS52Q8N1B4 723 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 OSMRQ99650 979 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 MRPL9Q9BYD2 267 aaKnown RBP8.09□□□□□ -1.11
LRRC28-203ENST00000447360 ZBP1Q9H171 429 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 KDM4CQ9H3R0 1056 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 TBC1D17Q9HA65 648 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 KCNH7Q9NS40 1196 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 PKD2L1Q9P0L9 805 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 STK39Q9UEW8 545 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
LRRC28-203ENST00000447360 COL1A2P08123 1366 aa8.09□□□□□ -1.12
LRRC28-203ENST00000447360 ANKRD11Q6UB99 2663 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 NFASCO94856 1347 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 IGKV6D-21A0A0A0MT36 114 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 A0A0U1RQF3 1178 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SPTLC1O15269 473 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 NARSO43776 548 aaKnown RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 GPR32O75388 356 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 DCNP07585 359 aaKnown RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SRFP11831 508 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SMARCA1P28370 1054 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 LMNB2Q03252 620 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 ZNF528Q3MIS6 628 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 ZNF484Q5JVG2 852 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 CLLU1OSQ5K130 101 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 CYP26C1Q6V0L0 522 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 DDX53Q86TM3 631 aaKnown RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 ECHDC2Q86YB7 292 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SLC44A3Q8N4M1 653 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 RILPL2Q969X0 211 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 RRP36Q96EU6 259 aaKnown RBP8.08□□□□□ -1.12
LRRC28-203ENST00000447360 MAP3K14Q99558 947 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SDF4Q9BRK5 362 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 RTKNQ9BST9 563 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 SPZ1Q9BXG8 430 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 RHOBTB2Q9BYZ6 727 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 PSTPIP2Q9H939 334 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 EPS15L1Q9UBC2 864 aa8.08□□□□□ -1.12
LRRC28-203ENST00000447360 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms