RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 ADAMTS10Q9H324 1103 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 DHX33Q9H6R0 707 aaKnown RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 XPNPEP1Q9NQW7 623 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.28
RFC4-208ENST00000447345 A0A087WZ62 844 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 E9PMD0 336 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 EFCAB14O75071 495 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 CSDE1O75534 798 aaKnown RBP13.27□□□□□ -0.29
RFC4-208ENST00000447345 UPP2O95045 317 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 AMHP03971 560 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 MYOGP15173 224 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 FGFR4P22455 802 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 DNAJB2P25686 324 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 Q7L0L9 218 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 FAM228AQ86W67 206 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 HERC6Q8IVU3 1022 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 RASSF8Q8NHQ8 419 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 PSPC1Q8WXF1 523 aaKnown RBP13.27□□□□□ -0.29
RFC4-208ENST00000447345 LINC01599Q8WXQ3 324 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 CDK5RAP3Q96JB5 506 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 FAM161BQ96MY7 647 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
RFC4-208ENST00000447345 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 ERVK-5Q9HDB9 667 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.29
RFC4-208ENST00000447345 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
RFC4-208ENST00000447345 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
RFC4-208ENST00000447345 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 DGAT1O75907 488 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
RFC4-208ENST00000447345 SRGAP2CP0DJJ0 459 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 STK38Q15208 465 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 CABP7Q86V35 215 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 TCP11Q8WWU5 503 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 ZNF396Q96N95 335 aaPredicted RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 ZBED2Q9BTP6 218 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 POLR3FQ9H1D9 316 aaPredicted RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 NKX2-4Q9H2Z4 354 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 TMX1Q9H3N1 280 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 MSRAQ9UJ68 235 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 FBXO2Q9UK22 296 aaPredicted RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 DBR1Q9UK59 544 aaKnown RBP13.26□□□□□ -0.29
RFC4-208ENST00000447345 ST3GAL5Q9UNP4 418 aa13.26□□□□□ -0.29
RFC4-208ENST00000447345 GPR182O15218 404 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 TLL1O43897 1013 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 GAS2O43903 313 aaKnown RBP13.25□□□□□ -0.29
RFC4-208ENST00000447345 DARSP14868 501 aaKnown RBP13.25□□□□□ -0.29
RFC4-208ENST00000447345 UBA7P41226 1012 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 LAMTOR4Q0VGL1 99 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 GRB10Q13322 594 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 RAB30Q15771 203 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 ZNF697Q5TEC3 545 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 AK8Q96MA6 479 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 GCOM2Q9BZD3 368 aaPredicted RBP13.25□□□□□ -0.29
RFC4-208ENST00000447345 CSRNP2Q9H175 543 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 SQORQ9Y6N5 450 aa13.25□□□□□ -0.29
RFC4-208ENST00000447345 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 DENND3A2RUS2 1198 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 LCHNA4D1U4 455 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 MGEA5O60502 916 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 CA3P07451 260 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 XRCC6P12956 609 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFC4-208ENST00000447345 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
RFC4-208ENST00000447345 MUTP22033 750 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 EIF4BP23588 611 aaKnown RBP13.24□□□□□ -0.29
RFC4-208ENST00000447345 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
RFC4-208ENST00000447345 KARSQ15046 597 aaKnown RBP13.24□□□□□ -0.29
RFC4-208ENST00000447345 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 RNF149Q8NC42 400 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 CHAMP1Q96JM3 812 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 ZDHHC9Q9Y397 364 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
RFC4-208ENST00000447345 ENPP3O14638 875 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 669.3 ms