RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FMO2Q99518 471 aa20.72■□□□□ 0.91
SDCBP-204ENST00000447182 EIF2AK1Q9BQI3 630 aaKnown RBP20.72■□□□□ 0.91
SDCBP-204ENST00000447182 CNOT10Q9H9A5 744 aaKnown RBP20.72■□□□□ 0.91
SDCBP-204ENST00000447182 PPP1R9AQ9ULJ8 1098 aa20.72■□□□□ 0.91
SDCBP-204ENST00000447182 FRMPD4Q14CM0 1322 aa20.72■□□□□ 0.91
SDCBP-204ENST00000447182 CCDC172P0C7W6 258 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 FMO5P49326 533 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 MAGOHP61326 146 aaKnown RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 KRT71Q3SY84 523 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 DUPD1Q68J44 220 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 APOBEC3HQ6NTF7 200 aaKnown RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 CCDC121Q6ZUS5 278 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 SP8Q8IXZ3 490 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 CTNNBL1Q8WYA6 563 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 RAPGEF5Q92565 580 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 MAGOHBQ96A72 148 aaKnown RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 PSMD1Q99460 953 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 RASSF9O75901 435 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 CYP3A4P08684 503 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 SETQ01105 290 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 CYP4A11Q02928 519 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 DRAP1Q14919 205 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-204ENST00000447182 CENPTQ96BT3 561 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 GPR88Q9GZN0 384 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 DPH5Q9H2P9 285 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 BCAS3Q9H6U6 928 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 DNAJC12Q9UKB3 198 aa20.71■□□□□ 0.91
SDCBP-204ENST00000447182 SIPA1L1O43166 1804 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 KLRG2A4D1S0 409 aaPredicted RBP20.7■□□□□ 0.9
SDCBP-204ENST00000447182 FAM187AA6NFU0 413 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 GYS1P13807 737 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 PLCD3Q8N3E9 789 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 TATDN2Q93075 761 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 SEC16BQ96JE7 1060 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 ERP44Q9BS26 406 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 ZDHHC18Q9NUE0 388 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 NR2E1Q9Y466 385 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 UBE4BO95155 1302 aa20.7■□□□□ 0.9
SDCBP-204ENST00000447182 DCDC2CA8MYV0 355 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 NUDT17P0C025 328 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 DRG2P55039 364 aaKnown RBP20.69■□□□□ 0.9
SDCBP-204ENST00000447182 NFIAQ12857 509 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 DHX34Q14147 1143 aaKnown RBP20.69■□□□□ 0.9
SDCBP-204ENST00000447182 QPCTQ16769 361 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 CCDC91Q7Z6B0 441 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 P3H4Q92791 437 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 TEKT1Q969V4 418 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 HSD17B14Q9BPX1 270 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 TRIM51Q9BSJ1 452 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
SDCBP-204ENST00000447182 GOLGA6L10A0A0M3HER8 536 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 EML1O00423 815 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 RIMBP2O15034 1052 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 RAD21O60216 631 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 FAM13AO94988 1023 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 SCNN1DP51172 638 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 CDR1P51861 262 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 HADHBP55084 474 aaKnown RBP20.69■□□□□ 0.9
SDCBP-204ENST00000447182 DR1Q01658 176 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 C1orf186Q6ZWK4 172 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 HOOK3Q86VS8 718 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 NCAPGQ9BPX3 1015 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 TUFT1Q9NNX1 390 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 IGSF9BQ9UPX0 1349 aa20.69■□□□□ 0.9
SDCBP-204ENST00000447182 ANKRD62A6NC57 917 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 IFFO1Q0D2I5 559 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 PPP2R5AQ15172 486 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 SIAH1Q8IUQ4 282 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 CACNA2D3Q8IZS8 1091 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 OSBPL7Q9BZF2 842 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 KLC4Q9NSK0 619 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 DMAC2Q9NW81 257 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
SDCBP-204ENST00000447182 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
SDCBP-204ENST00000447182 RGL1Q9NZL6 768 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 SEL1LQ9UBV2 794 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 SLURP2P0DP57 97 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 POLD1P28340 1107 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 BYSLQ13895 437 aaKnown RBP20.68■□□□□ 0.9
SDCBP-204ENST00000447182 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
SDCBP-204ENST00000447182 GMCL1P1Q8NEA9 526 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 EPB41L4BQ9H329 900 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 PARVGQ9HBI0 331 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 APEX2Q9UBZ4 518 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 ATP8A1Q9Y2Q0 1164 aa20.68■□□□□ 0.9
SDCBP-204ENST00000447182 GOLGA6L7A0A1B0GV03 622 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 SFI1A8K8P3 1242 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-204ENST00000447182 RFX1P22670 979 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 NMT1P30419 496 aaKnown RBP20.67■□□□□ 0.9
SDCBP-204ENST00000447182 GSCP56915 257 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-204ENST00000447182 LACTB2Q53H82 288 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-204ENST00000447182 ERMARDQ5T6L9 678 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 ZFPM1Q8IX07 1006 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 MYCT1Q8N699 235 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 GMCL1Q96IK5 515 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 FIZ1Q96SL8 496 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 PABPC3Q9H361 631 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms