RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 TRIM68Q6AZZ1 485 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 IFNL3Q8IZI9 196 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 AGAP11Q8TF27 550 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 EFHD2Q96C19 240 aaPredicted RBP9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
MCF2L2-203ENST00000447025 A0A088AWK7 358 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 FBP2O00757 339 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 HLA-DRAP01903 254 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 RETP07949 1114 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CDC27P30260 824 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 TRIM23P36406 574 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 RFC5P40937 340 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 GSDMDP57764 484 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 MYL6P60660 151 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 ROR1Q01973 937 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CUL1Q13616 776 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CYTH1Q15438 398 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 NAA35Q5VZE5 725 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 METTL2BQ6P1Q9 378 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 SLC30A10Q6XR72 485 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 DHX32Q7L7V1 743 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 USP48Q86UV5 1035 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 FAM133AQ8N9E0 248 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 EXD1Q8NHP7 514 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 ZNF606Q8WXB4 792 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CCDC28BQ9BUN5 200 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 BTBD7Q9P203 1132 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 DNM1LO00429 736 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 POP4O95707 220 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 NPPAP01160 153 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 FYNP06241 537 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 MTHFD1P11586 935 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 IFNA8P32881 189 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 SCTRP47872 440 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 LIMK1P53667 647 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 MAP3K7CLP57077 242 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 GSTO1P78417 241 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 TMPRSS15P98073 1019 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CDK18Q07002 472 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 SSPNQ14714 243 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CNPY1Q3B7I2 92 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 EAPPQ56P03 285 aaPredicted RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 SNRNP48Q6IEG0 339 aaKnown RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 PODNQ7Z5L7 613 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 SPATA24Q86W54 205 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 CNDP1Q96KN2 507 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 EHD4Q9H223 541 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 VPS16Q9H269 839 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 NDST4Q9H3R1 872 aa9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
MCF2L2-203ENST00000447025 PLEKHG1Q9ULL1 1385 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 HGSO14964 777 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 COBLO75128 1261 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 LMNAP02545 664 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 COL6A2P12110 1019 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ATP6V1C1P21283 382 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 TMF1P82094 1093 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 DAB2P98082 770 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ZNF268Q14587 947 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 Q3ZCU0 254 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 HABP4Q5JVS0 413 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 HIBCHQ6NVY1 386 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 RUFY4Q6ZNE9 571 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 TREML1Q86YW5 311 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 METTL2AQ96IZ6 378 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 FAM167AQ96KS9 214 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 NLRP4Q96MN2 994 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 DHRS9Q9BPW9 319 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 AP1M1Q9BXS5 423 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 MMRN2Q9H8L6 949 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ANKZF1Q9H8Y5 726 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 GGA3Q9NZ52 723 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ABCC1P33527 1531 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 MACROD2A1Z1Q3 448 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 E2F3O00716 465 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 TRDMT1O14717 391 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ENO2P09104 434 aaPredicted RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 RPS2P15880 293 aaKnown RBP9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 PPP2R1AP30153 589 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 AXLP30530 894 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 CTHP32929 405 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 ASMTP46597 345 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 SQLEQ14534 574 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 SPECC1LQ69YQ0 1117 aa9.29□□□□□ -0.92
MCF2L2-203ENST00000447025 FAM180BQ6P0A1 224 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms