RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 EEPD1Q7L9B9 569 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CENPKQ9BS16 269 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 DRC3Q9H069 523 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 ERCC6L2Q5T890 1561 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 NOP14P78316 857 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 NR1H3Q13133 447 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PDIA5Q14554 519 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 XKR3Q5GH77 459 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CENPUQ71F23 418 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 MTFR1LQ9H019 292 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 MRGBPQ9NV56 204 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 FANCLQ9NW38 375 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CEP95Q96GE4 821 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 CNOT10Q9H9A5 744 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 SORBS3O60504 671 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 BUB1BO60566 1050 aaPredicted RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 LAMC2Q13753 1193 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PPP2R2CQ9Y2T4 447 aa9.16□□□□□ -0.94
PTPN3-204ENST00000446349 PDS5AQ29RF7 1337 aaKnown RBP9.16□□□□□ -0.94
PTPN3-204ENST00000446349 IQGAP1P46940 1657 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 SYNJ2BP-COX16A0A087WUM0 186 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 DGAT1O75907 488 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 PSMA2P25787 234 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 MAPRE1Q15691 268 aaKnown RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 TRIM15Q9C019 465 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 COX16Q9P0S2 106 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ATP8B1O43520 1251 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 SOX5P35711 763 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ELOA2Q8IYF1 753 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ARHGAP18Q8N392 663 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 N4BP2L2Q92802 583 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 MRRFQ96E11 262 aaKnown RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 BHMT2Q9H2M3 363 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ATG16L1Q676U5 607 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 CALN1Q9BXU9 219 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 PCDHA5Q9Y5H7 936 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 PTPRMP28827 1452 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 GGPS1O95749 300 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 RWDD2BP57060 319 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 TTC31Q49AM3 519 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 PREPLQ4J6C6 727 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 SDE2Q6IQ49 451 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 DYNLL2Q96FJ2 89 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 WDR35Q9P2L0 1181 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 RGS2P41220 211 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 CUL1Q13616 776 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 SCFD2Q8WU76 684 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ZBTB18Q99592 522 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ADARB2Q9NS39 739 aaKnown RBP9.15□□□□□ -0.94
PTPN3-204ENST00000446349 PPME1Q9Y570 386 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 ZMYM2Q9UBW7 1377 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 KIF1AQ12756 1690 aa9.15□□□□□ -0.94
PTPN3-204ENST00000446349 A0A1B0GUA9 196 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 NEMP1O14524 444 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 SPDYE6P0CI01 402 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 KRT17Q04695 432 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 WHAMMQ8TF30 809 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 STMN1P16949 149 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 ST8SIA6P61647 398 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.95
PTPN3-204ENST00000446349 GDAP1Q8TB36 358 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 FSD1LQ9BXM9 530 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 NDST4Q9H3R1 872 aa9.15□□□□□ -0.95
PTPN3-204ENST00000446349 ADKP55263 362 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 CEP72Q9P209 647 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SUN1O94901 812 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 INPP5BP32019 993 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 NECTIN1Q15223 517 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 TBCCQ15814 346 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 DGKDQ16760 1214 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GLE1Q53GS7 698 aaKnown RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 FRA10AC1Q70Z53 315 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 SGMS1Q86VZ5 419 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 IP6K2Q9UHH9 426 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 POLIQ9UNA4 740 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 CYP2C19P33261 490 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 ARHGAP15Q53QZ3 475 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 LRRC8AQ8IWT6 810 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 UIMC1Q96RL1 719 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 C17orf75Q9HAS0 396 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 GOLGA8SH3BPF8 625 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 H3BRJ5 948 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 HOXA13P31271 388 aaPredicted RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 CDK17Q00537 523 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 AMPD2Q01433 879 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 CEP55Q53EZ4 464 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 RAD54LQ92698 747 aa9.14□□□□□ -0.95
PTPN3-204ENST00000446349 USP13Q92995 863 aaPredicted RBP9.14□□□□□ -0.95
PTPN3-204ENST00000446349 PGBD1Q96JS3 809 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms