RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 RHPN2Q8IUC4 686 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 IL27Q8NEV9 243 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
USE1-202ENST00000445667 ADGRA3Q8IWK6 1321 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 TTC3P53804 2025 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 A0A087WZ62 844 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 C9IYK1 514 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 DARSP14868 501 aaKnown RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 U2AF2P26368 475 aaKnown RBP eCLIP16.5■□□□□ 0.23
USE1-202ENST00000445667 TECP42680 631 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 MCM2P49736 904 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 DSC3Q14574 896 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 PAN2Q504Q3 1202 aaKnown RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 SLC24A5Q71RS6 500 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 TMEM143Q96AN5 459 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 JPH2Q9BR39 696 aaPredicted RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 FDXACB1Q9BRP7 624 aaPredicted RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
USE1-202ENST00000445667 PCDHB7Q9Y5E2 793 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 UNC80Q8N2C7 3258 aa16.5■□□□□ 0.23
USE1-202ENST00000445667 OR52Z1P0C646 297 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
USE1-202ENST00000445667 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
USE1-202ENST00000445667 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 GCOM2Q9BZD3 368 aaPredicted RBP16.49■□□□□ 0.23
USE1-202ENST00000445667 C1orf112Q9NSG2 853 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 NOL7Q9UMY1 257 aaKnown RBP16.49■□□□□ 0.23
USE1-202ENST00000445667 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
USE1-202ENST00000445667 H3BNC9 293 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 LYPLA2O95372 231 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
USE1-202ENST00000445667 CTNNB1P35222 781 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 BMPR1AP36894 532 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 RFC5P40937 340 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 FAM189BP81408 668 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 GPM6BQ13491 265 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 FAM102BQ5T8I3 360 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 NEK9Q8TD19 979 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 PIGOQ8TEQ8 1089 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
USE1-202ENST00000445667 NLRP4Q96MN2 994 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 SMC3Q9UQE7 1217 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
USE1-202ENST00000445667 COL4A4P53420 1690 aaPredicted RBP16.48■□□□□ 0.23
USE1-202ENST00000445667 TRANK1O15050 2925 aa16.48■□□□□ 0.23
USE1-202ENST00000445667 COL4A6Q14031 1691 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 REV3LO60673 3130 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 DLL1O00548 723 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 MED24O75448 989 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 SRGAP2CP0DJJ0 459 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 ORC2Q13416 577 aaPredicted RBP16.47■□□□□ 0.23
USE1-202ENST00000445667 EMC2Q15006 297 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
USE1-202ENST00000445667 ZNF410Q86VK4 478 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 CMTR2Q8IYT2 770 aaKnown RBP16.47■□□□□ 0.23
USE1-202ENST00000445667 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
USE1-202ENST00000445667 ANKEF1Q9NU02 776 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
USE1-202ENST00000445667 A0A0C4DFX4 3053 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 H3BQV1 296 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 FGFR1P11362 822 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 PSPC1Q8WXF1 523 aaKnown RBP16.46■□□□□ 0.23
USE1-202ENST00000445667 MTRQ99707 1265 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 TMEM161AQ9NX61 479 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 THEGQ9P2T0 379 aa16.46■□□□□ 0.23
USE1-202ENST00000445667 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
USE1-202ENST00000445667 C5orf67F2Z3F1 127 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 RB1P06400 928 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 RARRES1P49788 294 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 PTGDRQ13258 359 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 LARP1BQ659C4 914 aaKnown RBP16.45■□□□□ 0.22
USE1-202ENST00000445667 CATSPER4Q7RTX7 472 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 ECHDC2Q86YB7 292 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 TCP11Q8WWU5 503 aa16.45■□□□□ 0.22
USE1-202ENST00000445667 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms