RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-215ENST00000444609 IL31RAQ8NI17 732 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 MRPL11Q9Y3B7 192 aaKnown RBP11.83□□□□□ -0.52
HDAC8-215ENST00000444609 NEUROG3Q9Y4Z2 214 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 AKAP13Q12802 2813 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 SPATA31C2B4DYI2 1134 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 RPS6KA5O75582 802 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 CFBP00751 764 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 KLRC2P26717 231 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 BCAR1P56945 870 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 KRT76Q01546 638 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 PFKPQ01813 784 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 GHRHRQ02643 423 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 PPARAQ07869 468 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 SRSF5Q13243 272 aaKnown RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 CDC37Q16543 378 aaPredicted RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 PARM1Q6UWI2 310 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 DDX53Q86TM3 631 aaKnown RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 ABI1Q8IZP0 508 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 FGF14Q92915 247 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 C1orf115Q9H7X2 142 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 ST3GAL5Q9UNP4 418 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 MSRB2Q9Y3D2 182 aa11.82□□□□□ -0.52
HDAC8-215ENST00000444609 NOC2LQ9Y3T9 749 aaKnown RBP11.82□□□□□ -0.52
HDAC8-215ENST00000444609 RRN3P2A6NIE6 340 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 GPAA1O43292 621 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 SNHG28P0DPA3 235 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 TRIM27P14373 513 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 CCND2P30279 289 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 IGBP1P78318 339 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 ADCY1Q08828 1119 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 TROAPQ12815 778 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 ZNF852Q6ZMS4 543 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 NME8Q8N427 588 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 CHRDQ9H2X0 955 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 ERAP1Q9NZ08 941 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 PCDHA2Q9Y5H9 948 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 PCDHA1Q9Y5I3 950 aa11.81□□□□□ -0.52
HDAC8-215ENST00000444609 MIA3Q5JRA6 1907 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 OPLAHO14841 1288 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 AXIN1O15169 862 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 GPR182O15218 404 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 INPPL1O15357 1258 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 RANBP6O60518 1105 aaKnown RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 PAPLNO95428 1278 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 CNPP09543 421 aaKnown RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 MARK3P27448 753 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 CCR3P51677 355 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 TPRG1Q6ZUI0 275 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 APPBP2Q92624 585 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 ZNF707Q96C28 371 aaPredicted RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 IER2Q9BTL4 223 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 NACAP1Q9BZK3 213 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 MAN1C1Q9NR34 630 aa11.8□□□□□ -0.52
HDAC8-215ENST00000444609 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 MRPS17Q9Y2R5 130 aaKnown RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 ZFP37Q9Y6Q3 630 aaPredicted RBP11.8□□□□□ -0.52
HDAC8-215ENST00000444609 SHISA7A6NL88 538 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 CHURC1-FNTBB4DL54 471 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 LILRB3O75022 631 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 CEACAM1P13688 526 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 INSRRP14616 1297 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 FNTBP49356 437 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 SP4Q02446 784 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 DSC3Q14574 896 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 CLLU1OSQ5K130 101 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 SH3PXD2AQ5TCZ1 1133 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 GET4Q7L5D6 327 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-215ENST00000444609 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 IGSF21Q96ID5 467 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 LOXL4Q96JB6 756 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 LOXHD1Q8IVV2 1947 aa11.79□□□□□ -0.52
HDAC8-215ENST00000444609 SMIM35A0A1B0GVV1 85 aa11.78□□□□□ -0.52
HDAC8-215ENST00000444609 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
HDAC8-215ENST00000444609 RFPL2O75678 378 aa11.78□□□□□ -0.52
HDAC8-215ENST00000444609 GOLGA8HP0CJ92 632 aa11.78□□□□□ -0.52
HDAC8-215ENST00000444609 CXCL12P48061 93 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms