RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 HECTD1Q9ULT8 2610 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 GPAA1O43292 621 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 NEDD9Q14511 834 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 FAM160A2Q8N612 972 aaPredicted RBP16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 RHPN1Q8TCX5 695 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 FGF14Q92915 247 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 OSBP2Q969R2 916 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
SYNCRIP-203ENST00000444272 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 TOP1P11387 765 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 TRIM27P14373 513 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 KLRC2P26717 231 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 TMEM173Q86WV6 379 aaPredicted RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 PROSER1Q86XN7 944 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 ELAC1Q9H777 363 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 MAN1C1Q9NR34 630 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 GINS2Q9Y248 185 aa16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.49■□□□□ 0.238e-9■■□□□ 13.3
SYNCRIP-203ENST00000444272 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
SYNCRIP-203ENST00000444272 INPPL1O15357 1258 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 HOXA2O43364 376 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 ZNF806P0C7X5 589 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 GNAT2P19087 354 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 KRT76Q01546 638 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 C19orf57Q0VDD7 668 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 FZD5Q13467 585 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 TPRG1Q6ZUI0 275 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 NELL2Q99435 816 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 UBA5Q9GZZ9 404 aa16.48■□□□□ 0.23
SYNCRIP-203ENST00000444272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■■□ 25.7
SYNCRIP-203ENST00000444272 KDM3AQ9Y4C1 1321 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 PATL2C9JE40 543 aaKnown RBP16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 ATP5JP18859 108 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 CCND2P30279 289 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 HSD17B4P51659 736 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 BCAR1P56945 870 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 FAM189BP81408 668 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 KIAA1211LQ6NV74 962 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 PARM1Q6UWI2 310 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 SMG7Q92540 1137 aaKnown RBP16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 ST3GAL5Q9UNP4 418 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 MYO18BQ8IUG5 2567 aa16.47■□□□□ 0.23
SYNCRIP-203ENST00000444272 AXIN1O15169 862 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 MYBP10242 640 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 POLGP54098 1239 aaPredicted RBP16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 CTDSPL2Q05D32 466 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 STOX1Q6ZVD7 989 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 EMILIN2Q9BXX0 1053 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 NAPBQ9H115 298 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 PCDHA1Q9Y5I3 950 aa16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 USP9XQ93008 2570 aaPredicted RBP16.46■□□□□ 0.23
SYNCRIP-203ENST00000444272 CHURC1-FNTBB4DL54 471 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 M0R2C6 588 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 RFPL2O75678 378 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 PRB1P04280 392 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 CNPP09543 421 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 FNTBP49356 437 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 PFKPQ01813 784 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 GNPTABQ3T906 1256 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 SH3PXD2AQ5TCZ1 1133 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 TMEM40Q8WWA1 233 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 APPBP2Q92624 585 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 NACAP1Q9BZK3 213 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 SMOC1Q9H4F8 434 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 NEUROG3Q9Y4Z2 214 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 SDK1Q7Z5N4 2213 aa16.45■□□□□ 0.22
SYNCRIP-203ENST00000444272 OPLAHO14841 1288 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 SEC24BO95487 1268 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 INSRRP14616 1297 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CNR2P34972 360 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CCR3P51677 355 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CLLU1OSQ5K130 101 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CEP68Q76N32 757 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 RHOBTB2Q9BYZ6 727 aa16.44■□□□□ 0.22
SYNCRIP-203ENST00000444272 CHRDQ9H2X0 955 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms