RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 WNT7AO00755 349 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 MGEA5O60502 916 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 SLITRK3O94933 977 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 YWHABP31946 246 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 BMPR1AP36894 532 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 RFC5P40937 340 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 TRAPPC10P48553 1259 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 MCM2P49736 904 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 DRP2Q13474 957 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 DSC3Q14574 896 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 SYMPKQ92797 1274 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 CEP170P1Q96L14 293 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 PLVAPQ9BX97 442 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 DHX33Q9H6R0 707 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 PRDM6Q9NQX0 595 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 RGL1Q9NZL6 768 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 COG5Q9UP83 839 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 KIF3AQ9Y496 699 aa21.08■□□□□ 0.97
ATPAF2-201ENST00000444058 COL4A4P53420 1690 aaPredicted RBP21.08■□□□□ 0.96
ATPAF2-201ENST00000444058 GAS2O43903 313 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 TXKP42681 527 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 GPM6BQ13491 265 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 TJAP1Q5JTD0 557 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 PLA2G4FQ68DD2 849 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 NOSTRINQ8IVI9 506 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 NLRP7Q8WX94 980 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 MRPL38Q96DV4 380 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 DYDC2Q96IM9 177 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 TBC1D32Q96NH3 1257 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 EIF2AK1Q9BQI3 630 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 SH2D3AQ9BRG2 576 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 C11orf84Q9BUA3 381 aaPredicted RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 GCOM2Q9BZD3 368 aaPredicted RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 INO80BQ9C086 356 aaPredicted RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 TMEM161AQ9NX61 479 aa21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 SUCLA2Q9P2R7 463 aaPredicted RBP21.07■□□□□ 0.96
ATPAF2-201ENST00000444058 ZSCAN20P17040 1043 aaPredicted RBP21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 U2AF2P26368 475 aaKnown RBP eCLIP21.06■□□□□ 0.963e-6■■■□□ 15.4
ATPAF2-201ENST00000444058 MCM7P33993 719 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 NPEPPSP55786 919 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 AAK1Q2M2I8 961 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 NAALADL2Q58DX5 795 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 TPH2Q8IWU9 490 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 ASB2Q96Q27 587 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 COL25A1Q9BXS0 654 aaPredicted RBP21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 CHST12Q9NRB3 414 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 RALGAPA2Q2PPJ7 1873 aa21.06■□□□□ 0.96
ATPAF2-201ENST00000444058 XRCC6P12956 609 aaKnown RBP eCLIP21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 CTNNB1P35222 781 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 POLGP54098 1239 aaPredicted RBP21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 CYP4A11Q02928 519 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 CTTNQ14247 550 aaKnown RBP21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 P2RX5Q93086 422 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 TMX3Q96JJ7 454 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 LMAN2LQ9H0V9 348 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 TMEM60Q9H2L4 133 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 DACT1Q9NYF0 836 aa21.05■□□□□ 0.96
ATPAF2-201ENST00000444058 SFPQP23246 707 aaKnown RBP eCLIP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 GNL2Q13823 731 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 SKIV2LQ15477 1246 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 TIGD5Q53EQ6 642 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 RHPN2Q8IUC4 686 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 TCP11Q8WWU5 503 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 TRAIPQ9BWF2 469 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 ANKEF1Q9NU02 776 aa21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 NOL7Q9UMY1 257 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 MRPL42Q9Y6G3 142 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-201ENST00000444058 A0A087WZ62 844 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 A0A0U1RQF3 1178 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 ASAP2O43150 1006 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 HOXA2O43364 376 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 ATP2B1P20020 1258 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 XKR9Q5GH70 373 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 PSPC1Q8WXF1 523 aaKnown RBP21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 HLA-CQ95604 372 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 ZNF668Q96K58 619 aaPredicted RBP21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 FDXACB1Q9BRP7 624 aaPredicted RBP21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 COL4A3BPQ9Y5P4 624 aa21.03■□□□□ 0.96
ATPAF2-201ENST00000444058 OR52Z1P0C646 297 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 EMC2Q15006 297 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 TTC38Q5R3I4 469 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 PRPF31Q8WWY3 499 aaKnown RBP21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 IFT122Q9HBG6 1241 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 TUFT1Q9NNX1 390 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 NLRC5Q86WI3 1866 aa21.02■□□□□ 0.96
ATPAF2-201ENST00000444058 VCANP13611 3396 aa21.02■□□□□ 0.95
ATPAF2-201ENST00000444058 POTEMA6NI47 508 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 ZBTB39O15060 712 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 DGAT1O75907 488 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 CD2BP2O95400 341 aaKnown RBP21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 EOMESO95936 686 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 ZNF174Q15697 407 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 FAM102BQ5T8I3 360 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 RSPH1Q8WYR4 309 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 TMEM117Q9H0C3 514 aa21.01■□□□□ 0.95
ATPAF2-201ENST00000444058 TTC28Q96AY4 2481 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms