RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MTMR9Q96QG7 549 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 C1orf112Q9NSG2 853 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 IGKV6-21A0A0C4DH24 114 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 POU3F3P20264 500 aaPredicted RBP23.55■■□□□ 1.36
CDKN3-204ENST00000442975 FGFR4P22455 802 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 GATMP50440 423 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 OTUD6AQ7L8S5 288 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 GCOM2Q9BZD3 368 aaPredicted RBP23.55■■□□□ 1.36
CDKN3-204ENST00000442975 RGS18Q9NS28 235 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 PCDHB7Q9Y5E2 793 aa23.55■■□□□ 1.36
CDKN3-204ENST00000442975 MYH9P35579 1960 aaKnown RBP23.54■■□□□ 1.36
CDKN3-204ENST00000442975 MYO9BQ13459 2157 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 CSDE1O75534 798 aaKnown RBP23.54■■□□□ 1.36
CDKN3-204ENST00000442975 OR52Z1P0C646 297 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 RFC5P40937 340 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 MCM2P49736 904 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 GPM6BQ13491 265 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 XKR9Q5GH70 373 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 SLC24A5Q71RS6 500 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 NEK9Q8TD19 979 aa23.54■■□□□ 1.36
CDKN3-204ENST00000442975 ZNF689Q96CS4 500 aaPredicted RBP23.54■■□□□ 1.36
CDKN3-204ENST00000442975 MRPL42Q9Y6G3 142 aaKnown RBP23.54■■□□□ 1.36
CDKN3-204ENST00000442975 A0A087WZ62 844 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 SLITRK3O94933 977 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 NBR1Q14596 966 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 EMC2Q15006 297 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 MCTP1Q6DN14 999 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 KSR1Q8IVT5 923 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 CMTR2Q8IYT2 770 aaKnown RBP23.53■■□□□ 1.36
CDKN3-204ENST00000442975 IL27Q8NEV9 243 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 TMEM143Q96AN5 459 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 FDXACB1Q9BRP7 624 aaPredicted RBP23.53■■□□□ 1.36
CDKN3-204ENST00000442975 PPME1Q9Y570 386 aa23.53■■□□□ 1.36
CDKN3-204ENST00000442975 C9IYK1 514 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 DLL1O00548 723 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 ZBTB39O15060 712 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 CSPG5O95196 566 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 ZSCAN20P17040 1043 aaPredicted RBP23.52■■□□□ 1.36
CDKN3-204ENST00000442975 CDC42EP1Q00587 391 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 ORC2Q13416 577 aaPredicted RBP23.52■■□□□ 1.36
CDKN3-204ENST00000442975 DSC3Q14574 896 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 PTPROQ16827 1216 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 FAM43BQ6ZT52 329 aaPredicted RBP23.52■■□□□ 1.36
CDKN3-204ENST00000442975 ZNF410Q86VK4 478 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 CRIPAKQ8N1N5 446 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 RNF169Q8NCN4 708 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 PSPC1Q8WXF1 523 aaKnown RBP23.52■■□□□ 1.36
CDKN3-204ENST00000442975 RNF216Q9NWF9 866 aaPredicted RBP23.52■■□□□ 1.36
CDKN3-204ENST00000442975 RWDD3Q9Y3V2 267 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 COL4A3BPQ9Y5P4 624 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 VCANP13611 3396 aa23.52■■□□□ 1.36
CDKN3-204ENST00000442975 H3BNC9 293 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 FGFR1P11362 822 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 SFPQP23246 707 aaKnown RBP eCLIP23.51■■□□□ 1.35
CDKN3-204ENST00000442975 GJB2P29033 226 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 TECP42680 631 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 TRAPPC10P48553 1259 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 EXOC8Q8IYI6 725 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 HSD17B14Q9BPX1 270 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 C11orf84Q9BUA3 381 aaPredicted RBP23.51■■□□□ 1.35
CDKN3-204ENST00000442975 DHX33Q9H6R0 707 aaKnown RBP23.51■■□□□ 1.35
CDKN3-204ENST00000442975 ATP6V0A4Q9HBG4 840 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 LMCD1Q9NZU5 365 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 SMC3Q9UQE7 1217 aa23.51■■□□□ 1.35
CDKN3-204ENST00000442975 SPTBN5Q9NRC6 3674 aaKnown RBP23.51■■□□□ 1.35
CDKN3-204ENST00000442975 PRRC2BQ5JSZ5 2229 aaKnown RBP23.5■■□□□ 1.35
CDKN3-204ENST00000442975 TBKBP1A7MCY6 615 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 H3BQV1 296 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 LINC00271P0C7V0 271 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 BMPR1AP36894 532 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 CLP1Q92989 425 aaKnown RBP23.5■■□□□ 1.35
CDKN3-204ENST00000442975 MRPL38Q96DV4 380 aaKnown RBP23.5■■□□□ 1.35
CDKN3-204ENST00000442975 MTRQ99707 1265 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 TMEM161AQ9NX61 479 aa23.5■■□□□ 1.35
CDKN3-204ENST00000442975 LYPLA2O95372 231 aa23.49■■□□□ 1.35
CDKN3-204ENST00000442975 U2AF2P26368 475 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDKN3-204ENST00000442975 SPOUT1Q5T280 376 aaKnown RBP23.49■■□□□ 1.35
CDKN3-204ENST00000442975 FAM102BQ5T8I3 360 aa23.49■■□□□ 1.35
CDKN3-204ENST00000442975 CATSPER4Q7RTX7 472 aa23.49■■□□□ 1.35
CDKN3-204ENST00000442975 ERMNQ8TAM6 284 aa23.49■■□□□ 1.35
CDKN3-204ENST00000442975 PIGOQ8TEQ8 1089 aa23.49■■□□□ 1.35
CDKN3-204ENST00000442975 PRPF31Q8WWY3 499 aaKnown RBP23.49■■□□□ 1.35
CDKN3-204ENST00000442975 PIN4Q9Y237 131 aaKnown RBP23.49■■□□□ 1.35
CDKN3-204ENST00000442975 A0A087WWV3 80 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 GAS2O43903 313 aaKnown RBP23.48■■□□□ 1.35
CDKN3-204ENST00000442975 SRGAP2CP0DJJ0 459 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 TFF2Q03403 129 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 LAMTOR4Q0VGL1 99 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 TIGD5Q53EQ6 642 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 TJAP1Q5JTD0 557 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 ATXN2LQ8WWM7 1075 aaKnown RBP23.48■■□□□ 1.35
CDKN3-204ENST00000442975 TCP11Q8WWU5 503 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 COL25A1Q9BXS0 654 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-204ENST00000442975 INO80BQ9C086 356 aaPredicted RBP23.48■■□□□ 1.35
CDKN3-204ENST00000442975 ANKEF1Q9NU02 776 aa23.48■■□□□ 1.35
CDKN3-204ENST00000442975 TTC3P53804 2025 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 C5orf67F2Z3F1 127 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 RB1P06400 928 aa23.47■■□□□ 1.35
CDKN3-204ENST00000442975 MRPS5P82675 430 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms